Streptomyces nigrescens: HEK616_48620
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Entry
HEK616_48620 CDS
T08756
Name
(GenBank) hypothetical protein
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snig03019
]
HEK616_48620
03016 Transfer RNA biogenesis [BR:
snig03016
]
HEK616_48620
Enzymes [BR:
snig01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
HEK616_48620
Messenger RNA biogenesis [BR:
snig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HEK616_48620
Transfer RNA biogenesis [BR:
snig03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HEK616_48620
Prokaryotic type
HEK616_48620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
BDM71375
LinkDB
All DBs
Position
complement(5300885..5301322)
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AA seq
145 aa
AA seq
DB search
MRIPPRITRIGAAGALASALLLGGTAVAATPSATAAPHATTAYATAVHVKDVGSVCYSKL
PSQAHDTLDLIAKGGPFPYPKDGTVFDNREGILPKQSTGYYHEYTVITPGSPDRGARRIV
AGEKKDEDYYTADHYSTFDLVDRNC
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgagaatccccccacggattaccaggatcggcgccgcgggcgccctcgcatcggctctt
ctcctcggcgggaccgcggtcgccgccaccccctccgccacggccgccccgcacgccacg
acggcgtacgcaacggccgtgcacgtcaaggacgtcggcagcgtctgctactccaagctg
ccctcgcaggcccatgacaccctcgacctgatcgccaagggcggccccttcccgtacccg
aaggacgggacggtcttcgacaaccgcgaaggcatcctgccgaagcagagcaccggctac
taccacgagtacacggtcatcaccccgggctcgcccgaccgcggtgcccggcgcatcgtg
gccggtgagaagaaggacgaggactactacaccgccgaccactactccacgttcgacctg
gtcgaccgcaactgctga
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