Streptomyces nigrescens: HEK616_52330
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Entry
HEK616_52330 CDS
T08756
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snig03032
]
HEK616_52330
03400 DNA repair and recombination proteins [BR:
snig03400
]
HEK616_52330
Enzymes [BR:
snig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HEK616_52330
DNA replication proteins [BR:
snig03032
]
Prokaryotic type
DNA Topoisomerases
HEK616_52330
DNA repair and recombination proteins [BR:
snig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEK616_52330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SelB_WH2
FliT
Motif
Other DBs
NCBI-ProteinID:
BDM71746
UniProt:
A0ABM7ZZE9
LinkDB
All DBs
Position
5741437..5743884
Genome browser
AA seq
815 aa
AA seq
DB search
MARRSTKTPPPDDFEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRILY
QMNEMGLRPDRGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRLPLVDGHGNFG
SLGNDDPPAAMRYTECRMASATSLMTESIDEDTVDFSPNYDGQEREPVALPAAYPNLLVN
GTSGIAVGMATNMPPHNLGEVIAAARHLIKHPNADLDTLMRFVPGPDLPTGGRIVGLGGI
RDAYEKGRGTFKIRATVTVENVTARRKGLVVTELPFTVGPEKVISKIKDLVGSKKLQGIA
DVKDLTDREHGLRLVIEVKNGFNPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLKE
LLEVYVDHRFDVVRRRSEFRRSKRRDRLHLVEGLLTALVDIDEVIRLIRSSENSAQAKER
LIERFSLSDVQTQYILDTPLRRLTKFDRIELESERDRLQDEIEKLTRILESDAELRKLVS
GELAAVAKKYGTDRRTVLLESAGTTVGAVPLEVADDPCRVLLSSTGLLARTVTGEVPFDV
DAKRVKHDVIVSAVPATTRGEVGVVTSLGRLLRLPVIDLPQLPETAAAPSLAGGAPLAEF
LTLQDGEELVCLTTLDESSPGLALGTEQGVVKRVVPDYPAHKEELEVITLKEGDRIVGAA
ELRTGEEDLVFITSEAQLLRYPASQVRPQGRPAGGMAGVKLGEGAKVISFSAVDPAADAM
VFTVAGSHGTLDDSVATAKITPFDQYPRKGRATGGVRCQRFLKGEDCLIQAWAGTAPVRA
ADAKGSPVPLPEPDPRRDGSGVALTKPVAALAGPV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgccggacgacttcgaggagaggatcctcgac
atcgacgtcgtcgacgagatgcagggttccttcctcgagtacgcgtattcggtcatctac
tcgcgcgccctgccggacgcccgcgacggcctcaagcccgtgcaccgccgcatcctctac
cagatgaacgagatgggcctgcgccccgaccgcggctatgtgaagtgcgcccgggtcgtc
ggcgaggtgatgggtaagctccacccgcacggcgacgcgtccatctacgacgcgctggtc
cgcatggcgcagccgttctcgatgcggctgccgctggtcgacggccacggcaacttcggt
tcgctcggcaacgacgacccgccggccgcgatgcggtacacggaatgccggatggcgtcc
gcgacgtccctgatgaccgagtcgatcgacgaggacaccgtcgacttctcgccgaactac
gacggccaggagcgggagccggtcgccctccctgccgcgtatccgaacctcctcgtcaac
ggcacctccggcatcgccgtcggtatggcgacgaacatgccgccgcacaacctcggcgag
gtcatcgccgcggcccgccacctgatcaagcacccgaacgccgacctcgacaccctgatg
cgcttcgtcccgggcccggacctgccgaccggcggccggatcgtgggcctcggcggcatc
cgcgacgcctacgagaagggccgcggcacgttcaagatccgtgccacggtcacggtggag
aacgtcaccgcgcgccgcaagggcctggtcgtcaccgaactccccttcacggtcggcccg
gaaaaggtcatctccaagatcaaggacctggtcggctcgaagaagctccagggcatcgcg
gacgtcaaggacctcaccgaccgcgagcacggcctgcgcctggtgatcgaggtcaagaac
ggtttcaaccccgaagccgtcctggagcagctctacaagctgacgccgatggaggagtcc
ttcggcatcaacaacgtcgcgctggtggacggccagccgctgacgctgggcctgaaggag
ctgctggaggtctacgtcgaccaccgcttcgacgtggtgcgccgccgcagcgagttccgc
cgcagcaagcgccgcgaccggctgcacctggtcgagggcctgctgacggccctggtggac
atcgacgaggtgatccgcctgatccgctccagcgagaacagcgcgcaggccaaggagcgg
ctcatcgagcgcttctcgctgagcgacgtccagacccagtacatcctcgacaccccgctg
cgccggctgaccaagttcgaccggatcgagctggagtcggagcgggaccggctgcaggac
gagatcgagaagctgacccggatcctggagtcggacgccgagctgcgcaagctggtctcc
ggcgagttggccgcggtcgccaagaagtacggcacggaccggcgcacggtcctgctggag
tcggcgggcaccacggtcggcgcggtgccgctggaggtcgccgacgacccgtgccgggtg
ctgctgtcctcgacgggcctgctggcgcgtacggtcaccggcgaggtgccgttcgacgtc
gacgccaagcgggtcaagcacgacgtgatcgtctcggcggtgccggcgaccacccgcggc
gaggtgggcgtggtgacgtccctgggccggctgctccggctcccggtgatcgatctgccg
cagctcccggagaccgcggcggcgccgagcctcgcgggcggcgcaccgctcgcggagttc
ctgacgctccaggacggcgaggagctggtctgtctcaccaccctggacgagtcctcgccg
ggcctcgcgctcggtacggaacagggcgtggtcaagcgggtggtgcccgactaccccgcc
cacaaggaggagttggaggtcatcaccctcaaggagggcgaccgcatcgtgggcgcggcc
gagctgcgcaccggtgaggaggacctggtcttcatcaccagcgaggcgcagctgctgcgc
tatccggcgtcgcaggtacggccgcagggccggcccgcgggcggtatggccggggtcaag
ctgggcgagggcgcgaaggtgatctcgttctcggcggtcgatccggcggccgacgccatg
gtcttcaccgtcgccggttcgcacggcaccctggacgactcggtcgccacggccaagatc
accccgttcgaccagtacccgcgcaagggccgggcgaccggtggcgtgcgctgccagcgg
ttcctgaagggcgaggactgcctgatccaggcgtgggccggcacggcgccggtgcgggcg
gcggacgccaagggctcgccggtaccgctgccggagccggacccgcgccgggacggctcg
ggagtggccctgacgaagccggtggccgcgctggcgggaccggtgtga
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