Streptomyces nigrescens: HEK616_52450
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Entry
HEK616_52450 CDS
T08756
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snig03032
]
HEK616_52450
03400 DNA repair and recombination proteins [BR:
snig03400
]
HEK616_52450
Enzymes [BR:
snig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HEK616_52450
DNA replication proteins [BR:
snig03032
]
Prokaryotic type
DNA Topoisomerases
HEK616_52450
DNA repair and recombination proteins [BR:
snig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEK616_52450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BDM71758
LinkDB
All DBs
Position
complement(5757327..5759447)
Genome browser
AA seq
706 aa
AA seq
DB search
MTAEMSVPSTAVLTGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGYCDHIEVVLHDDGSVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDVEVDRNSKTHSISFRRGVPGIFTESGPDAPFD
PANGLHKGKRIAKTKTGTRVRYWADRQIFLKDAKLSLETLYARARQTAFLVPGLTLVVRD
ERGLDGAGKTEETFHYDGGISEFCEYLAQDKAVCDVLRLSGQGTFKETVPVLDDRGHMTP
TEVTRELGVDIALRWGTGYDATLRSFVNIIATPKGGTHVSGFERAVTKTVNEVLRSSKLL
RVAEDDVVKDDAMEGLTAVVTVRLAEPQFEGQTKEVLGTSAASRIVAQVVSRELKAFLTS
TKRDAKQQARAVLEKVVAAARTRIAARQHKEAQRRKTALESSSLPAKLADCRSDDVDRSE
LFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKSSVSDMLKNAECGAIIQVIGAGSG
RTFDIDAARYGKVIFLADADVDGAHIRILLLTLFQRYMRPMVEQGRVFAAVPPLHRIELT
NPKKGQDKYIYTYSDNELRQTLLELQRKNVRYKDSIQRYKGLGEMDADQLAETTMDPRHR
TLRRINISDLEAAEKTFDLLMGNEVAPRKEFITNSAATLDRSRIDT
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgagatgtccgtgccgtccaccgcagtgctgaccggggcagaccgggacggt
tccaactacaccgcgcggcatctgctcgtcctggagggcctcgaagcggtccgcaagcgc
cccggcatgtacatcggctccacggacagccgcggtctgatgcactgcctctgggagatc
atcgacaactccgtcgacgaggcgctcggcggctactgcgaccacatcgaggtggtcctc
cacgacgacgggtccgtggaggtgcgcgacaacggccgcggcatccccgtggacgtcgag
cccaagaccgggctgagcggcgtcgaggtcgtgatgaccaagctgcacgccggcggaaag
ttcggcggcggctcgtacgcggcctccggcggtctgcacggcgtcggcgcctcggtcgtc
aacgccctctccgcccggctcgacgtcgaggtcgaccgcaacagcaagacgcactcgatc
agcttccgccgtggcgtccccgggatcttcacggaatcgggcccggacgccccgttcgac
ccggccaacggcctgcacaagggcaagcggatcgccaagacgaagaccggcacccgcgtc
cgttactgggccgaccggcagatcttcctcaaggacgccaagctctccctggagacgctg
tacgcccgcgcccgccagaccgccttcctcgtcccgggcctcaccctggtcgtccgcgac
gagcgcggcctcgacggagccggcaagacggaggagaccttccactacgacggcggcatc
agcgagttctgcgagtacctggcgcaggacaaggcggtgtgcgacgtcctgcggctcagc
gggcagggcacgttcaaggagaccgtgccggtcctcgacgaccgcggccacatgaccccc
accgaagtcacccgcgaactgggcgtcgacatcgcgctgcgctggggcaccggctacgac
gccacgctccggtcgttcgtcaacatcatcgccacccccaagggcggcacccacgtctcc
ggcttcgagcgcgcggtcaccaagacggtcaacgaggtcctgcggtcgagcaagctgctc
cgtgtcgccgaggacgacgtcgtcaaggacgacgccatggagggcctgacggcggtcgtg
accgtacgcctcgccgagccgcagttcgagggccagaccaaggaggtgctcggcacctcg
gccgcctcccggatcgtcgcccaggtggtgagccgggagctgaaggcgttcctgacgtcc
acgaagcgggacgccaagcagcaggcgcgcgccgtcctggagaaggtcgtcgccgcggcc
cgcacccgcatcgccgcgcgccagcacaaggaggcgcagcggcggaagacggcgctggag
tcctcctcgctgccggccaagctcgcggactgccgcagcgacgacgtcgaccgcagcgag
ctgttcatcgtcgagggcgactccgcgctgggcaccgcgaagctggcccggaattccgag
ttccaggcgctgctcccgatccgcggcaagatcctgaacgtccagaagtcgtcggtctcg
gacatgctcaagaacgccgagtgcggcgccatcatccaggtcataggggccggttccggc
cgcaccttcgacatcgacgcggcccgctacggcaaggtcatcttcctggccgacgccgat
gtcgacggcgcccacatccgcatcctgctgctgaccctcttccagcgctacatgcgtccg
atggtcgagcagggccgggtcttcgccgccgtgccgccgctgcaccgcatcgagctgacc
aacccaaaaaaggggcaggacaagtacatctacacctactccgacaacgagctgcgccag
accctgctggagctccagcgcaagaacgtccgctacaaggacagcatccagcgctacaag
ggtctgggtgagatggacgccgaccagctcgccgagacgaccatggacccgcgccaccgc
accctgcgccggatcaacatcagcgacctggaggcggcggagaagaccttcgacctcctg
atgggcaacgaggtcgccccccgcaaggagttcatcaccaactccgcggccacgctggac
cgttcccggatcgacacctga
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