Streptomyces nigrescens: HEK616_52850
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Entry
HEK616_52850 CDS
T08756
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snig03016
]
HEK616_52850 (miaB)
Enzymes [BR:
snig01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HEK616_52850 (miaB)
Transfer RNA biogenesis [BR:
snig03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HEK616_52850 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BDM71798
LinkDB
All DBs
Position
complement(5809918..5811435)
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AA seq
505 aa
AA seq
DB search
MTSSTDRSHVVGVPKTYEIRTYGCQMNVHDSERLSGLLEEAGYVRAPKGGEEADVVVFNT
CAVRENADNRLYGNLGQLAPKKAAHPGMQIAVGGCLAQKDRDTIVKKAPWVDVVFGTHNI
GKLPVLLERARVQEEAQVEIAEALEAFPSTLPTRRESAYAAWVSISVGCNNTCTFCIVPA
LRGKEKDRRPGDILAEVEALVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGNIEG
LERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDQVLKAMRRSYRQERFLGII
EKVRAAMPDAAISTDIIVGFPGETDEDFEQTLHTVRESRFAQAFTFQYSKRPGTPAAEMD
GQIPKAVVQERYERLVALQEEISWEENKKQVGRTLDVMVAEGEGRKDDATHRLSGRAPDN
RLVHFTRPEEPVRPGDVVTVEVTYAAPHHLLAEGPAKAVRRTRAGDAWEKRTAAPAEKPK
GVLLGLPTIGAPAPSPAPTAGCGCD
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcagcaccgaccgcagccacgtcgtgggcgtgccgaagacctatgagatccgc
acctacgggtgccagatgaacgtccacgactccgagcggctgtccgggctgctggaggag
gccgggtacgtccgtgcgcccaaggggggcgaggaggccgacgtcgtcgtcttcaacacc
tgcgcggtgcgggagaacgccgacaaccgcctctacggcaacctcggccagctcgccccc
aagaaggcggcgcaccccggcatgcagatcgccgtgggcggctgcctcgcgcagaaggac
cgcgacaccatcgtcaagaaggccccctgggtcgacgtggtcttcgggacgcacaacatc
ggcaagctgccggtcctgctggagcgggcccgagtccaggaagaggcgcaggtcgagatc
gccgaggcgctggaggcgttcccctccacgctgccgacccgccgcgagagcgcgtacgcg
gcctgggtgtcgatctccgtcggctgcaacaacacctgcaccttctgtatcgtcccggcg
ctgcgcggcaaggagaaggaccgccggcccggcgacatcctcgccgaggtcgaggcgctg
gtcgccgagggcgtcagcgagatcaccctgctcgggcagaacgtcaacgcctacggttcc
gacatcggcgaccgcgaggccttcagcaagctgctgcgcgcctgcgggaacatcgagggc
ctggagcgggtgcgcttcacctccccgcacccgcgcgacttcaccgacgacgtgatcgcc
gccatggccgagacgcccaacgtgatgccgcagctgcacatgccgctgcagtccggctcc
gaccaggtcctcaaggccatgcgccgctcgtaccgccaggagcggttcctcggcatcatc
gagaaggtgcgcgccgccatgccggacgccgcgatctcgacggacatcatcgtcggcttc
ccgggcgagaccgacgaggacttcgagcagaccctgcacacggtccgcgagtcccgcttc
gcccaggcgttcacgttccagtactccaagcgccccggcacccccgcggccgagatggac
ggccagatccccaaggccgtcgtccaggagcgctacgagcggctggtcgccctccaggag
gagatctcctgggaggagaacaagaagcaggtcggccgcaccctggacgtcatggtcgcc
gagggtgagggccgcaaggacgacgcgacccaccgcctctccggccgggcgccggacaac
cgcctggtgcacttcacccggcccgaggagccggtccgccccggcgacgtggtgaccgtc
gaggtgacctacgccgctccgcaccacctcctcgcggagggcccggccaaggcggtccgc
cgcacccgcgccggcgacgcctgggagaagcgcaccgccgccccggccgagaagcccaag
ggcgtcctgctgggcctgcccaccatcggtgccccggccccgagcccggcacccaccgcg
ggctgcggctgcgactga
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