Streptomyces nigrescens: HEK616_53570
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Entry
HEK616_53570 CDS
T08756
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snig03016
]
HEK616_53570 (truB)
Enzymes [BR:
snig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HEK616_53570 (truB)
Transfer RNA biogenesis [BR:
snig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HEK616_53570 (truB)
Prokaryotic type
HEK616_53570 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BDM71870
LinkDB
All DBs
Position
complement(5908807..5909736)
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AA seq
309 aa
AA seq
DB search
MKRESNKPGGLVIVDKPAGFTSHDVVAKMRGMARTRRVGHAGTLDPMATGVLVLGLERAT
KLLGHLALTEKEYVGTVRLGQTTITDDAEGEITASKAAHGLAREDIDAGVAQLSGAIMQV
PSKVSAIKINGKRSYSRVREGEDVQIPARPVTVSSFVVHSAHETEAEDGTPVTDLLVSVE
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKLDRAHTLEQLQAAVDAPEGDGLPI
MPVGEAADAAFTRWDVTEAQARLLLNGARIAMPRFEADGPVAAFGPDGRFLALVENQGGK
AKSLAVFAI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgagagcaacaagccgggcggcctggtcatcgtcgacaagccggccggcttc
acttcgcacgacgtggtggcgaagatgcgcggtatggcccgcacccgccgggtcggccat
gccggcaccctcgacccgatggccaccggcgtgctcgtcctgggcctggaacgggccacc
aagctcctcggccacctggcgctgacggagaaggagtacgtcggcaccgtccggctgggc
cagaccacgatcaccgatgacgccgagggcgagatcaccgcgtccaaggcggcgcacggc
ctggcccgcgaggacatcgacgccggggtcgcgcagctgtccggcgcgatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcaacggcaagcggtcgtactcccgggtgcgcgag
ggcgaggacgtccagatcccggcccgcccggtcaccgtctcctcgttcgtggtgcactcc
gcgcacgagaccgaggcggaggacggcacgccggtgaccgacctgctggtctccgtcgag
tgctcctccggtacgtacatccgcgccctggcccgcgacctgggcgccgggctcggcgtc
ggcggccatctgaccgcgctgcgccgcacccgcgtcgggccgtacaagctggaccgggcg
cacaccctggagcagctgcaggcggcggtggacgcccccgagggcgacgggctgccgatc
atgccggtcggtgaggcggcggacgcggccttcacccgctgggacgtcaccgaggcacag
gcccgactgctgctcaacggcgcacggatcgcgatgccgcgcttcgaggccgacggtccg
gtcgcggccttcgggcccgacgggcggttcctggcgctggtggagaaccagggcgggaag
gccaagagcctggcggtcttcgccatctga
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