Streptomyces nigrescens: HEK616_54360
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Entry
HEK616_54360 CDS
T08756
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
snig
Streptomyces nigrescens
Pathway
snig02024
Quorum sensing
snig03060
Protein export
snig03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HEK616_54360 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HEK616_54360 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEK616_54360 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
snig02044
]
HEK616_54360 (ffh)
Enzymes [BR:
snig01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HEK616_54360 (ffh)
Secretion system [BR:
snig02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HEK616_54360 (ffh)
Eukaryotic Sec-SRP protein
HEK616_54360 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
cobW
ArsA_ATPase
Zeta_toxin
APS_kinase
nSTAND3
MMR_HSR1
AAA_24
AAA_16
AAA_31
AAA_30
MeaB
AAA_18
AAA_33
6PF2K
NPHP3_N
TsaE
MobB
Thymidylate_kin
TctA
AAA_26
Motif
Other DBs
NCBI-ProteinID:
BDM71949
LinkDB
All DBs
Position
complement(5991800..5993353)
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AA seq
517 aa
AA seq
DB search
MFDTLSDRLASTFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVRAFIKQIKERAL
GSEVSQALNPAQQVIKIVNEELIGILGGETRRLRFAKQPPTVIMLAGLQGAGKTTLAGKL
GRWLKRQGHAPLLVACDLQRPNAVNQLQVVSERAGVAFYGPEPGNGVGDPVQVAKDSIEY
ARTKQHDVVIVDTAGRLGIDAEMMQQAADIRDAVGPDEVLFVVDAMIGQDAVNTAEAFRD
GVGFDGVVLSKLDGDARGGAALSIAHVTGKQIMFASNGEKLDDFDAFHPDRMASRILGMG
DMLSLIEKAEQTFSQQEAEKMAAKLAKGPKEFTLDDFLAQMEQVRKMGSISKLLGMLPGM
GQMKDQINNLDEREVDRTAAVIKSMTPAERQDPTIINGSRRARIARGSGVDVSTVKNLVE
RFFDARKMMSKMAQGGMPGMPGMPGMPGMGGGARKKKQVKQAKGKRKSGNPMKRKADEQA
AAARREAAQAGNPLGLPQADQDPKNFELPEEFKKFMG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgatacgctttccgaccgcttggcgagtactttcaaaaacctccggggcaaggga
cgcctgagcgaggcggacatcgacgccacggcgcgcgagatccgcatcgcgctgctcgag
gcggacgtcgccctccccgtcgtccgggccttcatcaagcagatcaaggagcgcgccctc
ggctccgaggtctcccaggcgctgaacccggcccagcaggtcatcaagatcgtcaacgag
gagctcatcggcatcctcggcggcgagacccgccggctccgcttcgccaagcagccgccg
accgtgatcatgctcgccggtctgcagggtgccggtaagaccaccctcgccggaaagctc
ggccgctggctcaagcgacagggccacgccccgctgctggtcgcctgtgacctccagcgc
cccaacgccgtcaaccagctccaggtcgtctccgagcgcgccggcgtcgccttctacggc
cccgagccgggcaacggcgtcggcgacccggtccaggtcgccaaggactcgatcgagtac
gcgcggaccaagcagcacgacgtcgtgatcgtcgacaccgccggccgcctcggcatcgac
gccgagatgatgcagcaggccgccgacatccgcgacgcggtcggccccgacgaggtcctc
ttcgtcgtcgacgcgatgatcggtcaggacgcggtcaacaccgccgaggcgttccgcgac
ggcgtcggcttcgacggcgtggtgctctccaagctggacggcgacgcccgcggtggtgcc
gcgctctccatcgcgcacgtcaccggcaagcagatcatgttcgcctccaacggcgagaag
ctggacgacttcgacgcgttccacccggaccgcatggcgtcccgcatcctcggcatgggc
gacatgctcagcctgatcgagaaggccgagcagaccttcagccagcaagaggccgagaag
atggcggccaagctggcgaagggccccaaggagttcacgctcgacgacttcctggcccag
atggagcaggtccgcaagatgggctccatctccaagctgctcggcatgctgccgggcatg
ggccagatgaaggaccagatcaacaacctcgacgagcgcgaggtcgaccgcaccgccgcc
gtcatcaagtccatgaccccggccgagcgccaggacccgacgatcatcaacggctcccgc
cgcgcccgtatcgcccgcggttccggcgtcgacgtcagcacggtcaagaacctggtcgag
cggttcttcgacgcccgcaagatgatgtcgaagatggcccagggcggcatgcccgggatg
ccgggcatgccggggatgcccggcatggggggcggcgcccggaagaagaagcaggtcaag
caggccaagggcaagcgcaagagcggcaacccgatgaagcgcaaggccgacgagcaggcc
gcggccgcccgccgcgaggccgcccaggccggcaacccgctcggtctgccgcaggccgac
caggacccgaagaacttcgaactccccgaggaattcaagaagttcatgggctga
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