Streptomyces nigrescens: HEK616_54590
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Entry
HEK616_54590 CDS
T08756
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
snig
Streptomyces nigrescens
Pathway
snig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HEK616_54590 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snig03019
]
HEK616_54590 (rnc)
03009 Ribosome biogenesis [BR:
snig03009
]
HEK616_54590 (rnc)
03036 Chromosome and associated proteins [BR:
snig03036
]
HEK616_54590 (rnc)
Enzymes [BR:
snig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HEK616_54590 (rnc)
Messenger RNA biogenesis [BR:
snig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HEK616_54590 (rnc)
Ribosome biogenesis [BR:
snig03009
]
Eukaryotic type
90S particles
RNase
HEK616_54590 (rnc)
Prokaryotic type
rRNA processing factors
HEK616_54590 (rnc)
Chromosome and associated proteins [BR:
snig03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HEK616_54590 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BDM71972
UniProt:
A0ABN6R0K5
LinkDB
All DBs
Position
complement(6017731..6018600)
Genome browser
AA seq
289 aa
AA seq
DB search
MTGTVSSPKKAEDAHSASRKRGEETTPADTASSHTLLEGRLGYQLESALLVRALTHRSFA
YENGGLPTNERLEFLGDSVLGLVVTDTLYRIHPDLPEGQLAKLRAAVVNSRALAEVGRGL
DLGAFIRLGRGEEGTGGRDKASILADTLEAVIGAVYLDQGLDAAAELVHRLFDPLIEKSS
SLGAGLDWKTSLQELTATEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKE
AEQQAAESAWRAIRAAADEAAKTAASGDAASPGPDGSAPTADDGSSSAH
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgacaggcactgtgtctagccccaagaaggcggaagacgcccattcggcatcccgcaag
cgcggggaggaaacgactccggcggacacagcctcgtcccacacgcttctggaagggcgg
ctcgggtaccagctcgagtccgcccttctggtgcgtgcgctgacgcaccgctcgttcgca
tacgagaacggcggtctgcccaccaacgagcggctggagttcctcggggactcggtgctc
ggcctggtggtcacggacacgctgtaccgcatccaccccgacctgcccgaaggccagttg
gccaagttgcgggccgcggtggtcaactcgcgtgcgctcgccgaggtggggcgcggcctc
gacctcggtgccttcatccgcctcggacgcggcgaagagggcacgggcggccgggacaag
gcctccatcctcgccgacacgctcgaagcggtgatcggcgcggtctacctcgaccagggt
ctcgacgcggccgccgagctggtgcaccggctcttcgacccgctcatcgagaagtcctcc
agcctgggcgcgggcctggactggaagaccagcctccaggaactcaccgcgaccgagggt
ctcggcgtcccggagtacctggtcaccgagaccggcccggaccacgagaagacctttact
gctgccgcccgcgtcggtggtgtctcgtacggcaccggcaccggccgcagcaagaaggaa
gccgagcagcaggcggcggagtccgcgtggcgcgccattcgcgccgcggcggacgaggcg
gccaagacggcggcctccggcgacgcggcgtcgccgggcccggacggatcggctcccacc
gccgacgacggctcgtcgtcggcacactga
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