Streptomyces nigrescens: HEK616_55320
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Entry
HEK616_55320 CDS
T08756
Name
(GenBank) hypothetical protein
Organism
snig
Streptomyces nigrescens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
T7SS_signal
DUF6531
RHS
TEN_YD-shell
RadC
Prok-JAB
WXG100
EspA_EspE
Motif
Other DBs
NCBI-ProteinID:
BDM72045
LinkDB
All DBs
Position
complement(6106646..6111454)
Genome browser
AA seq
1602 aa
AA seq
DB search
MSIFGDAIDAVGEGASKITGAIERGAGEVVEKGAELTGDALETVGLDGAAHAVRSGGAKV
AGALGAHVDERELGDTEDPKELIHGDPGKIAETASHLKDFSAAFDRVANGMRKLGSGQHW
SGKAADAFREAFDMHPKQWMHAADACDDASKALTSYVETVIWAQHKAAEAIEKYHNAQEA
TRRSFEAYKAKVDRYNSQADAYNAAVEQGQDPGPMPQEPTVEVDPGAEGREAAQDLLKEA
RSQRNEAAEHARNAIKAALAHAPEKPALTQLAGAALKDGSQALVLEHLHIAGGALKAGAD
TLKLGRKINPLDPYNVTHPFQFADNTAMTLMGLAQAPLHPVETAKGMLGSGWGSDPGDAW
GSMWVNILGGKGGGGLAKGAARAGAKDIAESWARHAARNGGKITVRDRARIAACKIFGSD
PIDMATGRMHLPQTDITLPGSLPLTFTRTFESSYRTGRWFGPTWMSTVDQRLEIDSEGVI
LIGEEGNFLLYPHPAVGVPTRPIEGDGAPLELTPDGDYVLTDPVTGLRRYFTTYTDHLAV
LDEIADRHGNHHTFDYTEDGTPLAITHSAGYRLLLTTEERRITALHLAGAAPDGSDQLLV
TYGYDELGNLTTVTNSSNLPLRFTYDDAGRITSWTDTNSSSYHYVYDDQDRCITQGGIEG
HLRGDFTWGDPDPKTGLRTNHHRNSLGQVTTYQVNDHHHIVATTDPTGATTRTVRDAGHR
ILSTTDPLGRTTTIDYDDAGRPVTVTLPDGSTSTTTYDANGNPLTITGPDGATWTHTYDA
TGNRIASTDPTGATTTYTHDARGHVASITDALGNTTHLYCNAAGLPLSVTDPLGAVTHYR
RDAFGRTTSITDPLGETTHMLWSVEGKLLARIDPTGATEEWTYDGEGNRTSHTDAIGQTT
HFEYGHFDLLTARTDPDGVRYNFLHDTELRLTQVTNPQGLTWNYAYDPAGRLASETDFDD
RTLTYTHDPAGQLTTRTNALGEVTTYTRDTLGRITHKDAAGLLTTYLHDASGNLHQAANP
DATVTYTRDILGRITAETVNGRTMTFTYDALGRRTSRTTPTGHTTTYTYDAAGNRTAMDI
AGHVLTFDHDAAGQELTRTIGENLTLSHTWDPTGRLTSQSLTTLGTGTAQAPHTAAAEID
QVLSRSYTYRPDGHLTAIDDSHTGRRTFDLDRAGRVTAVHATDWTETYAYDAAGNQTHAT
WPDRHPNPSARGERTYEGTNITHAGRIRYEHDELGRVTLRQKTRVSRKPDTWRYTWNAED
RLTSVVTPEGATWRYLYDPSGRRIAKQRLANNAITVVEQVDFTWDGPTLTEQTTRTSHGQ
EVVSVTWDHRDHAPLTQTERKMIALIDAPQQEIDQRFFVIATDLVGSPAELFDTCGSIAW
RARTTLWGTTTWNRDAAVYMPLRFPGQYFDVETGLHYNFHRIYDAVNARYLSADPLGLTP
GPNPTIYVHNPHTWADVLGLSPCEMNRLLYGGRPGEGLPGSEGIAIPRRPTIQEMENLSV
KHGVEFAVTYKYGPGVSGRGGQYHLYSGVEASVQIPLEADRMFIYHTHPGGTPRPSTADK
ALMGLLEDMGSPQRISKVIPVGGGKAIPYGSGPFYGDLPNER
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcttcggtgatgccatcgacgcggtcggcgagggcgcgagcaagatcacgggt
gccattgagcgcggggcgggggaggtggtcgagaagggcgccgagctgaccggtgacgcg
ctggagacggtcggcctggacggcgcggcgcatgcggtccgtagtggcggcgcgaaggtg
gccggcgccctcggggcacacgtcgacgaacgcgagctcggcgacaccgaggatcccaag
gaactcatccacggcgaccccggcaagatcgccgagaccgcgtcccacctcaaggacttc
tccgccgcgttcgaccgggtggcgaacggcatgcgcaagctgggttcgggccagcactgg
agcggcaaggcggccgatgccttccgcgaggccttcgacatgcatcccaagcagtggatg
cacgccgccgacgcttgcgacgacgcctccaaggcactgacgtcgtacgtggagacggtg
atctgggcccagcacaaggccgccgaggcgatcgagaagtaccacaacgcccaggaagcc
acccgccgttccttcgaggcgtacaaggcgaaggtcgacaggtacaactcccaggccgac
gcctacaacgccgccgtcgagcagggccaggaccccggtcccatgccccaggagccgacc
gtcgaggtcgacccgggagccgagggccgcgaggccgcccaggacctgctcaaggaggcc
cgcagccagcgcaacgaggccgccgaacacgcccgcaacgccatcaaggccgccttggcg
cacgcgcccgagaagcccgccctcacccaactcgcgggcgctgccctcaaggacggcagc
caggcgctcgtcctcgagcatctgcacatagccggcggtgccctgaaggccggtgccgac
accctcaagctgggccgcaagatcaatccgctggacccgtacaacgtcacgcaccccttc
cagttcgccgacaacaccgccatgaccctcatgggcctggcccaggcacctcttcacccg
gtggagacggccaaggggatgctgggctcgggctggggcagcgatccgggcgacgcttgg
ggttccatgtgggtgaacatcctgggagggaagggcgggggcggcctggccaagggagcg
gctcgggccggtgccaaggacatcgccgagagctgggcgcggcatgctgcccgcaacggc
ggcaagatcaccgttcgcgaccgggcccggatcgccgcctgcaagatcttcggcagcgac
cccatcgacatggccaccggccgcatgcacctgccgcaaacggacatcaccctccccggc
agcctccccctcaccttcacccgcaccttcgagtcgtcctaccgcaccggccgctggttc
ggcccgacctggatgtccacggtcgatcagcgcctggagatcgactccgagggcgtcatc
ctcatcggcgaagagggcaacttcctcctctacccgcacccggccgtcggcgtccccacc
cgcccgatagagggcgacggcgcccccctggaactcacccccgacggcgactacgtcctg
accgacccggtgacgggcctacgccgctacttcaccacctacaccgaccacctcgccgtc
ctcgacgagatcgccgaccgccacggcaaccaccacaccttcgactacaccgaagacggc
acaccgctcgccatcacccacagcgccggctaccgcctcctcctcaccacggaggagcgc
cgcatcaccgccctccacctggccggcgccgcccccgacggcagcgaccaactcctggtc
acctacggctacgacgaactcggcaacctcaccaccgtcaccaactcctccaacctcccc
ctccgcttcacctacgacgacgccggccgcatcacctcctggaccgacaccaacagcagc
agctaccactacgtctacgacgaccaggaccgctgcatcacccagggcggcatcgaaggc
cacctccgcggcgacttcacctggggcgaccccgacccgaaaaccggcctgcgcaccaac
caccaccgcaactccctcggccaggtcaccacctaccaggtcaacgaccaccaccacatc
gtcgccaccaccgacccgacgggcgccaccacccggacggtgcgggatgccgggcaccga
atcctgtccaccaccgaccccctgggccgcaccaccaccatcgactacgacgacgccggc
cgcccggtgaccgtcaccctccccgacggctccacgtccaccaccacgtacgacgccaac
ggcaatccgctgacgatcaccggtcccgacggcgccacctggacccacacctacgacgcc
accggcaaccgaatagcgtccacggaccccaccggcgccacgaccacctacacccacgac
gcccgcggccacgtggcttccattaccgatgcccttggtaacaccacccacctctactgc
aacgctgccggcctcccgctctccgtcaccgaccccctcggcgcggtgacccactaccgc
cgcgacgccttcggccgcaccacctccatcacggacccgctgggcgaaaccacccacatg
ttgtggtccgtcgaaggaaagttgctggcccggatagaccccaccggcgccaccgaggaa
tggacctacgacggcgaaggcaaccgcacttcccacaccgacgccatcggccagacgacc
cacttcgaatacggccacttcgacctcctcacggcccgcaccgaccccgacggcgtccgc
tacaacttcctccacgacaccgaactacgcctcacgcaggtcaccaatccccagggcctg
acctggaattacgcgtatgaccccgccggtcgcctcgcctccgaaacggacttcgacgac
cgcaccctcacctacacccacgaccccgccggccagctcaccacccgcaccaacgccctc
ggcgaggtcaccacctacacccgcgacaccctcggccgcatcacgcacaaggacgccgcg
ggtctgctgacgacctacctccacgacgcctccggcaacctccaccaggccgccaacccc
gacgcgacagtcacctacacccgcgacatcctcggccgcatcaccgccgaaacagtcaac
ggccgcaccatgacgttcacctacgacgccctgggccgccgcaccagccgcaccaccccc
accggccacaccaccacctacacctacgacgccgccggcaaccgcaccgccatggacatc
gccggccacgtcctcaccttcgaccacgacgccgccggccaagaactcacccgcaccatc
ggcgagaacctcaccctctcccacacctgggaccccaccggccgcctcacctcccagtcc
ctcaccaccctcggaaccggcaccgcccaagccccccacaccgccgccgcagagatagac
caggtcctctcccgctcctacacctaccgccccgacggccacctcaccgcgatcgacgac
tcccacaccggccgccgcaccttcgacctcgaccgcgccggccgcgtcaccgccgtccac
gccaccgactggaccgagacctacgcctacgacgccgccggcaaccaaacccacgccacc
tggcccgaccgccaccccaacccctcagcccgaggcgaaaggacctacgagggcaccaac
atcacccacgccggccgcatccgttatgaacacgatgagctgggtcgcgtcaccctccgc
caaaaaactcgcgtctcgcgtaagccggacacctggcgctacacctggaatgccgaagac
cgcctcacatccgtggtcactccggaaggcgcgacgtggcgttacctctacgatccctcc
ggacgtcgaatagccaaacaacggctcgcaaataacgcgatcacagtcgtcgagcaagta
gatttcacctgggacggccccacgctcacggaacaaaccacccgcacgtcacacggtcag
gaagttgtatccgttacctgggaccaccgcgatcatgcccccctcacgcagaccgaacgt
aaaatgatcgccctgatagacgcgcctcaacaggaaatagatcagcgcttctttgtcatt
gccaccgacttggtcggcagccccgccgaactttttgacacgtgcggctccatcgcctgg
cgcgctcgcaccactctctggggaactaccacctggaaccgcgatgctgcggtctacatg
cccctaaggttcccaggccagtacttcgacgtcgaaacgggacttcactacaacttccat
cgaatatacgacgccgtcaacgctcgatacctctcagcggatcccctcggtctaacgcct
ggccccaaccccaccatctatgtccacaatccgcacacttgggcagatgtcctgggtctg
tcaccgtgcgaaatgaaccgtcttctgtatggagggcgacctggggaaggactgccagga
agcgaggggatcgcgatccctcggcgcccgacaattcaagagatggagaatctttccgtg
aaacacggtgttgagtttgccgtgacctacaaatatggtcccggggtaagtggtagaggt
ggacaataccacctgtactcgggtgtggaggcgtccgttcaaattcctcttgaggcggac
cgcatgttcatctatcacacgcatcccggggggacgccgcgtcccagcacggcagataaa
gccctgatggggcttctcgaagacatgggctcgcctcagcgcatctcgaaggtgattcca
gttgggggaggcaaggcgataccatacggaagtggaccattctacggagatctgccaaat
gagcgctga
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