Streptomyces nigrescens: HEK616_57450
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Entry
HEK616_57450 CDS
T08756
Name
(GenBank) penicillin-binding protein
KO
K05364
penicillin-binding protein A
Organism
snig
Streptomyces nigrescens
Pathway
snig00550
Peptidoglycan biosynthesis
snig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HEK616_57450
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snig01011
]
HEK616_57450
Peptidoglycan biosynthesis and degradation proteins [BR:
snig01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HEK616_57450
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BDM72258
LinkDB
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Position
6345818..6347269
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AA seq
483 aa
AA seq
DB search
MIRGIRHTAAFSFLLLLALLVNAARVQVYEAERYDASPANRRAAIARYAQPRGAVLVAGR
PVTGSRDSGGRLRYERAYADGPLYAPVTGYSSQTYGTSLLEHAEDPVLAGTDPRLATFPW
WDRLTRTHQPGGQVHTTIDPRMQRAAFAGLDGRKGAVAAIEPRTGRILALVSSPSYEPGV
LSGNGPAVDDAWRRLNAAAERPMLNRALAQTYPPGSTFKVVTAAAALESGRVTDIDAPTD
SPDPYLLPGTATRLGNAAKDCADASLKEAFRASCNTVFARLGDEVGLRGMAAMARRFGFN
DRRLRVPSPVAPSHFDTRMDPAQVALSAIGQYDTAATPLQMAMVAAAVANGGQLTPPYLV
DQVTDADGVMVADGPHPTTRQVINPATAEQLQEMMIDVVAHGSGRRAAVKGLTVGGKTGT
AQHGVHNEGTPYAWFISWARTNDTYEPTVAVAVVVEDAAAERADISGGGHAAPIARAVMA
VAR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgcggtatccggcacaccgccgcgttctccttcctgctcctcctcgcgctcctg
gtcaacgccgcccgggtgcaggtctacgaagcggagcgctacgacgccagcccggccaac
cggcgggcggcgatcgcacggtacgcgcagccgcggggcgccgtgctcgtcgcgggccgg
ccggtcaccggctcgcgggacagcggcgggcggctgcgctacgagcgcgcgtacgccgac
gggccgctctacgcaccggtcaccggctactcctcgcagacctacgggacgtcgctgctg
gaacacgccgaggaccccgtgctcgccggcaccgacccgcggctcgccaccttcccctgg
tgggaccggctgacccggacccaccagcccggcggccaggtccacaccaccatcgatccg
cggatgcagcgcgccgcgttcgccgggctggacggccggaagggcgcggtggccgcgatc
gagccgcgcaccgggcggatcctggcgctggtcagctccccgtcgtacgaaccgggggtg
ctgtccggcaacgggcccgcggtcgacgatgcctggcgccgcctgaacgccgccgcggag
cggccgatgctcaaccgggcgctggcacagacctatccgcccgggtcgaccttcaaggtc
gtcaccgcggccgccgcactggagagcggccgggtcaccgacatcgacgcgccgacggac
tcgccggatccgtacctgctgccgggcaccgccacccggctcggcaatgccgcgaaggac
tgtgcggacgcctcgctgaaggaggcgttccgggcctcctgcaacaccgtgttcgcgcga
ctgggcgacgaggtcgggctgcgcgggatggccgcgatggcgcggcggttcggcttcaac
gaccgccgactgcgggttccgtcgccggtcgcgcccagccatttcgacacccgcatggat
ccggcgcaggtcgcgctgtcggccatcgggcagtacgacaccgcggccaccccgctccag
atggcgatggtcgcggcggcggtcgccaacggggggcagctgacgccgccgtacctcgtc
gaccaggtgaccgacgcggacggggtgatggtcgcggacggtccgcatccgaccacccgc
caggtgatcaacccggccaccgccgagcagctccaggagatgatgatcgacgtggtcgcg
cacggcagcgggcggcgcgccgccgtcaagggcctcaccgtcggcggcaagacgggcacc
gcccagcacggggtgcacaacgagggcacgccgtacgcctggttcatctcctgggcgcgg
accaacgacacctacgaaccgacggtcgcggtggccgtggtcgtcgaggacgcggcggcc
gagcgcgcggacatcagcggcggggggcatgcggcgccgatcgcccgggcggtgatggcg
gtcgcgcggtga
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