Streptomyces nigrescens: HEK616_66720
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Entry
HEK616_66720 CDS
T08756
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snig03032
]
HEK616_66720 (topA)
03400 DNA repair and recombination proteins [BR:
snig03400
]
HEK616_66720 (topA)
Enzymes [BR:
snig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HEK616_66720 (topA)
DNA replication proteins [BR:
snig03032
]
Prokaryotic type
DNA Topoisomerases
HEK616_66720 (topA)
DNA repair and recombination proteins [BR:
snig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEK616_66720 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BDM73185
LinkDB
All DBs
Position
complement(7357965..7360802)
Genome browser
AA seq
945 aa
AA seq
DB search
MSPTSEATKGGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPAKYKG
EPWARLGVNVDADFQPIYVVNSDKKDQVKKLKELLAESDELYLATDEDREGEAIAWHLQE
ILKPKVPVHRMVFHEITKDAIREAVANPRDLNQKLVDAQETRRILDRLYGYEVSPVLWKK
VMPRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFSTGRAGDPSDPSTLTARLNS
VDGRRVAQGRDFGPNGQLKNSDVLHLDEANARALAAALENTDFSVRSVESKPYRRSPYAP
FRTTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAVAAARAQVTQLY
GAGYLPDKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQ
MKDATGNSVTVKIGGTSADGRDAEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLP
QVAQGDALAAREITADGHATKPPARYTEATLVKELEEREIGRPSTYASIIGTILDRGYVF
KKGTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQAVPWLRRFYFGE
GEEASSVGAASDAGNGDGDHLGGLKELVTDLGAIDAREISSFPVGEGIVLRVGRYGPYVE
RGEKDSEGHQRADVPEDLAPDELTVAYAEELLAKPSGDFELGMDPVSGHQIVAKDGRYGP
YVTEILPEGTPKTGKNAVKPRTASLFKSMSLDTVTLADALKLMSLPRVVGKDPEGVEITA
QNGRYGPYLKKGTDSRSLEGEDQIFSITLEEALAIYAQPKQRGRAAAKPPLKELGTDPVS
GKPVVVKDGRFGAYVTDGETNATLRRDDDVETITPERGYELLAEKRAKGPAKKKTAKKAP
AKKTAAKKTVAKKTAAKKTTAKKTTAKKATAKTAAAKKTAASAED
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgaagccacgaagggcggcggccgccgacttgtcatcgtcgagtcg
cctgccaaggcgaagacgatcaagggctacctcggccctggctatgtggtcgaggccagc
gtggggcacatccgtgacctgcccaacggcgcggcggaggtcccggcgaagtacaagggc
gagccctgggcccggctcggggtgaacgtcgacgccgatttccagcccatctatgtggtg
aacagtgacaagaaggaccaggtcaaaaagctcaaggagctgctggccgaatccgacgag
ctctacctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccaggag
atcctcaagcccaaggtcccggtccaccgcatggtgttccacgagatcaccaaggacgcg
atccgcgaggccgtcgccaatccgcgcgatctgaaccagaagctggtcgacgcccaggag
acccgccggatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaag
gtcatgccgcggctgtcggccggccgggtgcagtccgtggcgacccgtctcgtcgtcgag
cgggagcgcgagcgcatcgccttccgctccgccgagtattgggacctgaccggcaccttc
tccaccgggcgggccggcgacccgagcgacccctcgacgctgaccgcccgcctgaacagc
gtcgacggccgccgcgtcgcacagggccgcgacttcggccccaacgggcagctcaagaac
agcgacgtgctccacctggacgaggcgaacgcccgcgcgctcgccgccgccctggagaac
accgacttctcggtgcgctccgtggagtccaagccgtaccggcgctccccgtacgcgccg
ttccggaccacgaccctccagcaggaggccagccgcaagctcggcttcggcgccaaggcg
acgatgcaggtggcgcagaagctgtacgagaacggcttcatcacctatatgcgtacggac
tccaccacgctctcggacaccgcggtcgccgcggcccgggcgcaggtgacgcagctgtac
ggtgccggctacctgccggacaagccgcgcacgtacgccggcaaggtcaagaacgcgcag
gaggcgcacgaggcgatccgcccctccggcgaccgcttccgcacgcccgccgagaccggg
ctgaccggcgaccagttcaagctctacgagctgatctggaagcggaccgtcgcctcccag
atgaaggacgcgaccggtaactccgtcaccgtcaagatcggcggcacctccgccgacggc
cgggacgccgagttcagcgcgtccggcaagaccatcaccttccacggcttcctcaaggcc
tacgtggagggcgccgacgaccccaacgccgagctggacgaccgcgagcgccggctgccg
caggtcgcccagggcgacgcgctggccgcccgggagatcaccgccgacgggcacgccacc
aagccgcccgcccgctacaccgaggccacgctggtcaaggagctggaggagcgggagatc
ggccgcccgtcgacgtacgcgtcgatcatcggcaccatcctcgaccgcggctatgtcttc
aagaagggcaccgcgctcgtcccctccttcctctccttcgcggtggtcaacctcctggag
aagcacttcggccggctggtcgactacgacttcaccgccaagatggaggacgacctcgac
cgcatcgcccgtggtgaagcgcaggccgtgccgtggctgcggcgcttctacttcggcgag
ggcgaggaagcgagttcggtgggtgccgcgtcggacgccggcaacggtgacggcgaccac
ctcggcgggctcaaggagctggtcacggacctgggcgcgatcgacgcccgggagatctcg
tccttcccggtcggcgagggcatcgtgctgcgggtcggccgctacggcccgtacgtcgag
cgcggtgagaaggacagtgagggccaccagcgcgccgacgtgcccgaggacctcgcgccc
gacgagctgaccgtggcgtacgcggaggagctgctcgccaagccgagcggcgacttcgag
ctgggcatggatccggtcagcggccaccagatcgtcgccaaggacggccgctacggcccg
tacgtcaccgagatcctccccgagggcaccccgaagaccggcaagaacgcggtcaagccg
cgcaccgcctcgctcttcaagtcgatgtccctggacaccgtgacgctggcggacgcgctc
aagctgatgtcgctgccgcgcgtcgtcggcaaggaccccgagggcgtggagatcaccgcg
cagaacggccgctacggcccgtacctgaagaagggcacggactcgcgctccctggagggt
gaggaccagatcttcagcatcaccctcgaagaggcgctggcgatctacgcccagcccaag
cagcgcgggcgggccgccgccaagccgccgctgaaggagctgggcacggacccggtcagc
ggcaagccggtggtggtcaaggacggccggttcggcgcgtacgtgaccgacggcgagacc
aacgcgacgctgcggcgggacgacgacgtcgagacgatcacccccgagcgcggctacgag
ctgctggcggagaagcgcgccaaggggccggcgaagaagaagacggccaagaaggcgccg
gcgaagaagacggccgccaagaagacggtggcgaagaagaccgcggccaagaagaccacc
gcgaagaagacgaccgccaagaaggccaccgcgaagaccgcggcggccaagaagacggcg
gcttcggcggaggactga
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