Streptomyces nigrescens: HEK616_67380
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Entry
HEK616_67380 CDS
T08756
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
snig
Streptomyces nigrescens
Pathway
snig03030
DNA replication
snig03430
Mismatch repair
snig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEK616_67380
03430 Mismatch repair
HEK616_67380
03440 Homologous recombination
HEK616_67380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snig03032
]
HEK616_67380
03400 DNA repair and recombination proteins [BR:
snig03400
]
HEK616_67380
Enzymes [BR:
snig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEK616_67380
DNA replication proteins [BR:
snig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEK616_67380
DNA repair and recombination proteins [BR:
snig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEK616_67380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_30
Rad17
AAA_14
AAA_19
AAA_18
AAA_5
AAA_16
zf-CXXC
nSTAND3
Mg_chelatase
TsaE
AAA_28
ORC-CDC6-like
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BDM73251
UniProt:
A0ABM8A3L2
LinkDB
All DBs
Position
complement(7437480..7440050)
Genome browser
AA seq
856 aa
AA seq
DB search
MSVGPDIVVSVSSLALYRRYRPETFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCG
KTTSARILARCLNCEEGPTPTPCGTCQSCVDLARNGRGSIDVIEIDAASHGGVDDARELR
EKAFFGPASSRYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRS
RTHHYPFRLVPPGTLREYLGQVCGQEDIPVEDGVLPLVVRAGAGSVRDSMSVMDQLLAGA
GADGVTYAMATALLGYTDGSLLDSIVEAFAAGDGAAAFEVVDRVIEGGNDPRRFVADLLE
RLRDLVILAAVPDAGEKGLIDAPADVVERMTAQASVFGAAELSRAADLVNTGLTEMRGAT
SPRLQLELICARVLLPAAYDDERSVQARLDRLERGAGAALLGGAGAGGPGGVPGGPGAGP
GGEPAPVVASGGGPAAGYVPGPEAHPPMPAPGGPSGPAAARAAVRGTGAPAAPSAPAAAP
PAPVAPAAGGVQGGEGVAPPAGGPAGGREGGPARPGAWPGGTGRGGAGTAAGAGPGGAAS
AGEAPGGAAGGSGAGNGSGAAGGSGTGGAARQPGGWPTAVAPGQGGGQVPAPQGGRTPAG
PPAASGPAGGAPGGASGPGPQAGGPAPGAAQGAAQVRQMWPDILEAVKDRRRFTWILLSQ
NAQVSGFDGTTLQIGFPNAGARDSFANGGSEDVLKDVLAERFQVQWRVEAIVDPSGGANP
PAGGAPRSGGGGFGGAPAQPSAPQAPSSQGGPAAPASSGGTYGQSGGTAGGAGGSAGGGG
QGARMAREAVAPSASAGGASGAPAVEPSYTPEPPPMSIEYDMPAEDDPDLVDSALSGHDL
IVRELGATVIEEFTNE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggtggggcccgatatcgtcgtaagcgtgtcgtcccttgcgctgtaccgccgctac
cgccccgagaccttcgccgaggtcatcgggcaagagcacgtgaccgatccgctgcagcag
gcgctgcggaacaaccgcgtcaaccacgcgtatctgttcagcggtccgcgcggctgcggc
aagacgaccagcgcgcggatcctggcccggtgcctcaactgtgaggaaggtcccactccg
acgccctgcgggacgtgccagtcgtgcgtggacctggccaggaacgggcggggctcgatc
gatgtgatcgagatcgacgcggcgtcccatggtggtgtcgacgacgcgcgtgagctgcgg
gagaaggcgttcttcgggccggccagcagccggtacaagatctacatcatcgacgaggcc
cacatggtcacgtcggcgggcttcaacgcgctgctcaaggtggtcgaggagccgccggag
cacctgaagttcatcttcgccacgaccgagcccgagaaggtcatcgggacgatccggtcg
cggacccatcactatccgttccggctggtgccgccgggcacgctgcgcgagtacctggga
caggtctgcgggcaggaggacatcccggtcgaggacggcgtgctgccgctggtcgtacgg
gccggtgccgggtccgtgcgcgactcgatgtcggtgatggaccagctgctcgccggggcg
ggcgccgacggtgtgacctatgccatggccacggccctgctcgggtacaccgacggctcg
ctgctggattccatcgtggaggcgttcgccgccggggacggggcggcggcgttcgaggtc
gtggaccgggtcatcgagggcgggaacgacccccggcggttcgtggccgatctgctggag
cggctgcgggacctggtgatcctcgcggcggtgccggacgcgggggagaaggggctgatc
gacgcccccgcggacgtcgtggagcggatgacggcgcaggcctcggtgttcggggcggcg
gagctgagccgcgccgccgacctggtcaacacggggctgacggagatgcggggcgcgacc
tcgccgcggctccagctggagctgatctgtgcgcgggtgctgctgcccgcggcgtacgac
gacgagcggtcggtgcaggcgcgtctggaccgtctggagcggggcgcgggcgcggcgctg
ctgggcggagcgggcgcgggcggccccggtggcgtgcccggtggccccggtgcgggcccc
gggggtgagccggcgcccgtcgtggcgtccggtggcgggcccgcggccgggtacgtaccg
ggtccggaggcgcatccgccgatgccggcgcccggcggcccgtcggggccggctgccgcg
cgtgccgcggtacggggcacgggggcgcccgccgctccctcggctcctgctgccgcgccc
ccggcgccggtcgccccggctgcgggtggcgtgcagggcggcgagggcgtggccccgccg
gccggtgggccggccggtggccgtgagggcggtccggcgcggcccggggcgtggcccggc
gggacgggccggggcggtgcgggcacggctgccggcgccggtcccggtggtgccgcctcc
gctggcgaggcgcccggcggcgcggcgggcggcagtggcgcgggcaacggcagcggagca
gccggtggcagtggcaccggtggtgcggcgcggcagcccgggggctggccgacggccgtg
gcgccggggcagggcggcggccaggtgccggcgccgcagggcggcaggacgcccgcgggg
ccgccggccgcgagcggcccggccggtggcgcgcccggtggggcgtccgggcccggaccg
caggccgggggaccggctccgggagcggcgcagggtgccgcccaggtgcgccagatgtgg
ccggacatcctggaggcggtgaaggaccgccggcgcttcacctggatcctgctgagccag
aacgcccaggtctccggcttcgacggcacgaccctgcagatcggcttccccaacgccggc
gcccgcgacagcttcgccaacggcggcagtgaggacgtgctgaaggacgtcctggccgag
cggttccaggtgcagtggcgggtcgaggcgatcgtcgacccgtccggcggcgccaatccg
ccggccggcggcgcgccccgtagcgggggcggcggcttcggcggggcgccggcgcagccg
tccgcaccccaggcaccgtcctcccagggcggcccggcggcgccggcgtcgtccggcggg
acgtacggccagagcggcggcacggccggcggtgccggtgggagcgccggcggcggcggt
cagggcgcccggatggcgcgggaggcggtggccccgtccgcgtccgcgggcggcgcctcg
ggcgcacccgccgtggagccctcgtacacccccgagcccccgccgatgtcgatcgagtac
gacatgccggccgaggacgaccccgacctcgtcgactccgcgctgagcgggcacgacctc
atcgtccgcgagctgggtgcgacggtgatcgaggagttcaccaacgagtag
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integrated database retrieval system
