Streptomyces nigrescens: HEK616_69550
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Entry
HEK616_69550 CDS
T08756
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snig03021
]
HEK616_69550
Transcription machinery [BR:
snig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEK616_69550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Rnk_N
AAA_16
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
BDM73468
LinkDB
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Position
7683174..7683869
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AA seq
231 aa
AA seq
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MSTDSDEASTPTDADLLALHVKGDPDAFGEIVRRHRDRLWAVALRTLGDREEAADAVQDA
LVSAYRAAHTFRGQSAVTTWLHRITVNACLDRARKAASRRTAPVADTERLEQLLEPEESA
AVPAERQDLHRELLRALRTLPEEQRAALVLVDMQGYPVAEAAAILDIPTGTVKSRCARGR
ARLLPLVTHLRADGGGSNPASRGRNRAQGTSVPPTAGPTDTGAVKGGGGRA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccgacagcgacgaggcttcgacaccaaccgacgccgatctccttgcgctgcac
gtgaagggcgaccccgatgcgttcggggagatcgtccggcgtcatcgcgaccggctctgg
gcggtggcgctgcgcactctcggtgatcgtgaggaagctgcggacgccgtacaggacgcc
ctggtctccgcctaccgcgcggcccacaccttccgcggacagtccgcagtgacgacctgg
ctgcaccgcatcacggtcaacgcctgcctggaccgggcccgcaaggccgcctcccggcgc
accgcgccggttgccgacaccgagcggctggagcagctcctcgaacccgaggagtccgcc
gcggtccccgccgagcgccaagacctgcaccgtgagctgctccgcgccctgcgcaccctc
cccgaggaacagcgcgccgccctcgtcctcgtcgacatgcagggctaccccgtcgccgag
gcagccgcgatcctcgacatcccgaccggaacggtgaagagccgctgcgcacgcggccgt
gcccgcctcctccccttggtcacccatctgcgggctgacggcgggggtagcaacccggcg
agccggggaaggaaccgggcgcaggggacatccgtcccaccgacggcaggaccgacggac
acaggtgccgtgaagggcggaggtgggcgagcgtga
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