Streptomyces nigrescens: HEK616_69720
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Entry
HEK616_69720 CDS
T08756
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
snig
Streptomyces nigrescens
Pathway
snig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HEK616_69720 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snig03400
]
HEK616_69720 (recF)
DNA repair and recombination proteins [BR:
snig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HEK616_69720 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
AAA_33
AAA
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BDM73485
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Position
7698666..7699802
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AA seq
378 aa
AA seq
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MHVTHLSLADFRSYARVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAPL
VRMGAERAVIRAAVAQGERQQLIELELNPGKANRARINRSSQVRPRDVLGIVRTVLFAPE
DLALVKGDPGERRRFLDELITARSPRMAGVRADYDRVLKQRNTLLKTAALARRHGGRQMD
LSTLDVWDQHLARAGAELLAQRLDLIAALQPLADKAYEQLAPGGGPLTLEYRPSAGEAMA
GATSREDLYGVLLAALGEARKQEIERGVTLVGPHRDDLVLKLGQLPAKGYASHGESWSYA
LALRLASYDLLRAEGNEPVLVLDDVFAELDARRRERLAELVAPGEQVLVTAAVDDDVPGV
LVGARYAVFDGAVEKVTP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgacgcatctgtcgctcgccgacttccgctcgtacgcccgggtcgaggtcccg
ctcgatccgggcgtcacggcgttcgtgggccccaacgggcagggcaagaccaatctcgtc
gaggcggtcggctatctggccacgctcggcagccaccgggtctcctcggacgcgccgctg
gtgcggatgggcgccgagcgggcggtcatccgggccgccgtcgcgcagggcgagcggcag
cagctgatcgagctggagctgaatcccggcaaggccaatcgcgcccgtatcaacaggtcc
tcgcaggtcagaccgcgtgatgtgctgggcatcgtgcggacggtgctgttcgcgccggag
gacctggcgctggtcaagggcgaccccggcgagcgccggcggttcctggacgagctgatc
accgcgcgctcgccccggatggccggggtgcgcgccgactacgaccgcgtcctcaagcag
cgcaacaccctgctcaagaccgcggcgctggcgcggcggcacggcgggcggcagatggac
ctgtcgacgctcgacgtgtgggaccagcatctggcccgggccggcgccgaactgctggcg
cagcgcctcgacctgattgccgcgctgcagccgctcgccgacaaggcgtacgagcaactc
gccccgggcggcggcccgttgacgctggagtaccgtccctcggcgggcgaggcgatggcc
ggtgcgacgtcccgtgaggacctgtacggcgtgctgctggccgcgctcggcgaggcccgc
aagcaggagatcgagcgcggggtgacgctggtcggcccgcaccgcgacgacctggtgctg
aagctcggccagctgccggccaagggttacgccagccacggcgagtcctggtcgtacgcg
ctggcgctgcggctggcctcgtacgacctgctgcgtgccgagggcaacgaaccggtgctg
gtcctggacgacgtcttcgccgagctggacgcgcggcgccgggagcggctggcggagctg
gtggccccgggcgagcaggtgctggtgacggcggcggtcgacgacgacgtgcccggggtg
ctggtcggggcgcgctacgcggtctttgacggcgccgtcgagaaggtgaccccgtga
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