Streptomyces nigrescens: HEK616_77880
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Entry
HEK616_77880 CDS
T08756
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snig03021
]
HEK616_77880
Transcription machinery [BR:
snig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEK616_77880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_23
HTH_37
Sigma70_ECF
HTH_3
DUF7343
HTH_24
MarR
Trp_repressor
Motif
Other DBs
NCBI-ProteinID:
BDM74301
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All DBs
Position
SNP1:373645..374526
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AA seq
293 aa
AA seq
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MSVSSARAETTQDVGVVDGPTAVPAPPTELPLIESPENLAPGDARELTHLFFERLEKLEE
GTPEYQYARNTLIEMNLSLVRYAARRFRNRGDDFEDIVQVGTIGLIKAIDRYDLARNVEF
TTLAIPYITGEMKRFFRDTTWDVRVPRRLQELRVDLARAGEHLANELGRDPKVSELAAHL
DIPEEEVIEGQVAANGYSASSIDVTVGDDDNDVPLADLLGEYDEEMYLFEDLHTLKPLLD
GLEDRDRRILELRFGQEMTQAEIGEILGVSQMHVSRLLNRCLAQLRTAMLRTD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcagcagcgccagggccgagaccactcaggacgtcggtgtcgtcgacgggccg
accgcggtacccgctccgcccaccgagctgcccctgatcgagtcgcccgagaacctcgcc
cccggagacgcccgggaactgacccacctgttcttcgagcggttggaaaagctggaggag
ggcacgcccgagtaccagtacgcgcgcaatacgctcatcgagatgaacctctcgctggtg
cgttatgccgcccggcgcttccgcaatcgcggcgatgatttcgaggacatcgtgcaggtc
ggcacgatcggcctgatcaaggccatcgaccgctacgacctggcgcgcaacgtggaattc
accacgctcgccatcccgtacatcacgggtgagatgaagcgcttcttccgtgacaccacc
tgggacgtacgggtgccccggcggctgcaggagttgcgggtcgacctcgcccgcgccggt
gagcacctcgccaacgagctgggccgggaccccaaggtctccgagctggcagctcacctg
gatattccggaggaagaggtcatcgaggggcaggtcgccgccaacggctacagcgcctcg
tccatcgacgtcaccgtgggggacgacgacaacgacgtaccactcgcggacctgctcggt
gaatacgacgaggagatgtacctcttcgaggacctgcacacgctcaagccgctgctggac
gggctggaggaccgcgaccgccggattctggaactccgcttcggccaggaaatgacccag
gccgagatcggggaaatcctcggtgtctcccagatgcacgtctcccgcctgctcaaccgc
tgcctggcccagctgcgcaccgccatgctccgcacggactga
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