Streptomyces nigrescens: HEK616_80910
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Entry
HEK616_80910 CDS
T08756
Name
(GenBank) transcription regulator LysR family protein
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
snig
Streptomyces nigrescens
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snig03000
]
HEK616_80910
Transcription factors [BR:
snig03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HEK616_80910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
HTH_20
HTH_5
HTH_23
Mga
HTH_24
HTH_28
Glyco_trans_1_3
Motif
Other DBs
NCBI-ProteinID:
BDM74604
LinkDB
All DBs
Position
SNP1:complement(685898..686860)
Genome browser
AA seq
320 aa
AA seq
DB search
MALELRHLRYLLAVAENGTFTRAAEELHISQPTLSQQIKQLERILDVQLLDRTGRTVRLT
DAGEAYVHHARRALRDLAAAERAVHDVHDLTRGHLRLAVTPTFTAYLTGPLAAELHTRHP
GITMTLREMPQDRIESGLLADEIDLGIAFTGTHLPGISATELFTETLTLVTSARHPAGHD
HPLPVDDLAGHQLALLSGDFATRGHIDDYFTQHGVSPHIAVEANSIQAITEIVQRTTLAT
VLPDALTHDHPHLIPIPLDPPLPSRTVALLTRTDAYRSAAGRAFTRLTHDLIRTRPYTGP
GTGTAAGSEADADLEPPAEH
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggccctggaactgcgccatctgcgctacctgctcgccgtcgccgagaacggcaccttc
acccgcgccgccgaagaactgcacatctcccagcccaccctctcccagcagatcaagcag
ctggagcggatcctcgacgtgcagctgctggaccgcaccggccgcaccgtgcgactcacc
gacgccggcgaggcatacgtccaccacgcccgccgcgccctgcgtgacctcgccgccgcg
gaacgcgccgtccacgacgtgcacgacctcacccgcggccacctgcgcctggcggtcacc
cccaccttcaccgcctacctcaccggcccgctcgccgccgaactccacacccgccacccc
ggcatcacgatgaccctgcgggagatgccccaggaccgcatcgaatccggcctgctcgcc
gacgagatcgacctcggcatcgccttcaccggcacccacctccccggcatctccgccacc
gaactgttcaccgaaaccctcaccctcgtcaccagcgcccgccaccccgccggtcacgac
caccccctgcccgtagacgacctcgccggacaccaactcgccctgctgagcggcgacttc
gccacccggggccacatcgacgactacttcacccagcacggcgtgagcccccacatcgcg
gtggaggccaactccatccaggccatcaccgagatcgtccagcgcaccacactggccacc
gtgctccccgacgccctcacccacgaccacccccacctcatccccatccccctcgacccg
cccctccccagccgcaccgtcgccctcctcacccgcaccgacgcctaccgaagcgccgcc
ggtcgcgccttcacccgcctcacccacgacctcatccgcacccgcccctacaccggaccg
gggaccggtacagccgctggctccgaagcggatgcggatcttgagcctccggcggagcac
tga
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