Sulfuriferula nivalis: SFSGTM_00030
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Entry
SFSGTM_00030 CDS
T06628
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sniv
Sulfuriferula nivalis
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sniv03032
]
SFSGTM_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
sniv03400
]
SFSGTM_00030 (gyrB)
Enzymes [BR:
sniv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SFSGTM_00030 (gyrB)
DNA replication proteins [BR:
sniv03032
]
Prokaryotic type
DNA Topoisomerases
SFSGTM_00030 (gyrB)
DNA repair and recombination proteins [BR:
sniv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SFSGTM_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
DUF7132
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BBO99294
UniProt:
A0A809RCB8
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Position
3124..5520
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AA seq
798 aa
AA seq
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MNKEYDSNSIRILKGLDAVRKRPGMYIGDTSDGTGLHHMVFEVLDNAIDEALGGHCDDIK
VIIHADNSVSVADNGRGIPVDIKQDDEFKRSAAEIVMTELHAGGKFDQNSYKVSGGLHGV
GVSVVNALSDWLKLKIWRNGHSHQMEFRQGVAVSPLVETGKSDRHGTEVHFYASKETFGL
VEYHYDILAKRIRELSFLNNGVKIELIDQRDGKSENFALSGGVAGFVQYMNRAKTVLHPH
AFYAIGEKDGMTVEVAMQWNDSYAETVQCFTNNIPQRDGGSHLTGLRTAMTRTLNQYIEQ
NEYAKKAKIDTTGDDMREGLTCVLSVKVPEPKFSSQTKDKLVSSEVQPVVSEVVSQKLSE
FLLENPNDAKIIVNKIIDAARARDAARKAREMTRRKGVLDGVGLPGKLADCQEKDPALSE
IYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARFDKLVSSQEIVTLITALGTGIG
KDEYNADKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKY
GKSERYLKDEHEFKAYLLSEATKDAKLITGAENGNEISGVALENIAQSYLLAEAIIQRMS
RVIDGAVMHTLMDIEPISLDTQAQAEHAKATIDAAIHDKNVSIEVEYNEAQETYSLKILR
QYHGNTQVTRLDSSFVQSVDYIQIRDTSQVLQGLLSAGARAQRGEKSQPVSSFKDALEWL
LNDVKRGLSIQRYKGLGEMNPSQLWETTMDPKVRRLMRVQIEDAINADEIFVTLMGDQVE
PRRAFIETNAMGVRNLDV
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaatacgattcaaatagcatccgtatattaaaaggtctggatgctgtgcgt
aaacgtccaggtatgtacataggcgacacttctgacggtactggtctacaccacatggtg
tttgaggtgctagacaatgcgattgatgaagctttgggtgggcattgtgatgatattaag
gttattattcatgcagataactcagtttcagtagcagataacggtcgcggtattcctgtt
gatattaaacaagatgatgagtttaaacgctctgccgctgaaattgttatgacagaatta
catgctggcggaaaattcgatcaaaattcatataaagtttctggtgggttgcacggtgta
ggtgtgtccgtagttaatgcattgtctgattggctaaaattaaaaatctggcgtaatggg
catagccatcaaatggaatttagacagggcgtcgcagtttcaccattagttgaaacggga
aaatcagatcgtcatggcacagaagtgcatttttacgcttcaaaagagacatttggtttg
gttgagtatcactatgatattttagccaaacgtatccgtgagctttcatttcttaataat
ggcgtaaaaatcgagttaatcgatcagcgtgatggcaaaagcgaaaattttgcgctttct
ggcggtgttgcaggtttcgtacaatatatgaatcgtgcaaaaaccgtactgcacccacat
gctttttatgctattggtgaaaaagatggtatgacagtagaggttgccatgcagtggaat
gactcctatgccgaaactgtacaatgttttactaataatattcctcagcgtgatggcggt
agtcatttgacaggcctgcgtaccgcgatgacacgtacgctcaatcaatatattgagcaa
aatgaatatgcaaagaaagctaaaatagacaccactggtgatgacatgcgtgagggactt
acctgcgtgttatcggtcaaagtgccagagcctaaattttcgtcacaaactaaagataag
ctggtttcatccgaagttcagcctgtcgtatcggaagttgtcagccaaaagttgagtgag
tttttgttagagaacccgaacgacgccaaaatcattgttaataaaattatcgatgccgcc
agagcgcgtgatgctgcgcgtaaagcaagagaaatgacacgacgtaaaggcgttttagat
ggcgtgggcttgccaggtaagctggcggattgccaagagaaagatcctgccctgtctgaa
atctacctcgtagaaggagattctgcgggtggttcagcaaaacaaggtcgggatcgtaaa
ttccaggcgattttgccgctcaaaggtaaaatcttaaacgtagaaaaggcacgttttgac
aaactggtttccagccaagaaatcgtgacgttaattacggcattagggacgggtataggt
aaagacgaatataacgctgataaattgcgttatcaccgcatcattatcatgactgacgcg
gacgtcgatggatcgcatatccgtacattgctactgaccttcttttatcgccaaatgcca
gagctggtagagcgcggacatatctacatcgctcaaccaccattgtacaaagtgaaatat
ggtaagtctgaacgctatcttaaagatgagcacgaatttaaagcgtatttgctttctgaa
gccactaaagatgccaagttgataaccggcgcagaaaatggtaatgaaatcagtggggta
gcgctagaaaatatcgcccaatcctatctgcttgccgaagccatcattcagcgcatgagc
cgcgttattgacggtgcggtaatgcatacgttgatggatattgagccaatatctctggat
acacaagcacaagccgaacatgctaaagcaactattgatgctgctatacatgataaaaat
gtcagcatagaagttgaatataatgaagcgcaggaaacctattcattaaaaatattgcgc
cagtatcatggcaacacacaagttacccgcctggatagcagctttgttcaaagtgtagac
tacattcaaattagagataccagtcaggtactacaaggcctgctaagtgcgggtgcacgt
gctcaacgaggtgaaaaatcacaaccagtaagctcatttaaagacgcattagaatggttg
ctcaacgacgtaaaacgtggcttgtccatacagcgttataaaggactgggtgaaatgaac
ccaagtcagttgtgggaaacaaccatggatcctaaagtccgccgcctgatgcgagtacaa
attgaagatgcgattaacgcagacgaaatctttgttaccctgatgggggatcaagtggaa
ccccgtcgtgccttcattgaaaccaatgcgatgggcgtgcgtaacttagacgtgtaa
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