Sulfuriferula nivalis: SFSGTM_00400
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Entry
SFSGTM_00400 CDS
T06628
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
sniv
Sulfuriferula nivalis
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sniv03000
]
SFSGTM_00400
Transcription factors [BR:
sniv03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SFSGTM_00400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
THDPS_N_2
HTH_5
MarR_2
HTH_20
O-FucT
Motif
Other DBs
NCBI-ProteinID:
BBO99331
UniProt:
A0A809S767
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Position
46596..47468
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AA seq
290 aa
AA seq
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MFEAVARNLSFSKAARELHLSQPAVSMQVKLLEESVGLPLFEQLGKKIFMTEAGREMFHY
SKSIAEQLHEAEAVFTQMKGLDKGELRIAVASTANYFATQLLAHFCQAHPDIVVHLDVAN
RAELLAQMEQNSLDLAVMGQPPEGHDLVAESFMENPLVVIAPPTHPLQGQTQIPASKLAG
ETMIAREAGSGTRSASERYFQQHHIKPRTGLVMNTNEAIKQAVQAGMGLAVVSLHTVALE
LQTQRLITLDIVDFPIRRHWFVVHRQDKRLSTAALAFKQFLLAQGASVQP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaagccgttgcgcgcaatttgagcttttccaaagctgcgcgcgagctgcatctg
tcgcagccggcggtgtctatgcaagttaaactgctggaagaaagtgtgggtttgcctctg
tttgaacagctcggtaaaaaaatcttcatgaccgaagctgggcgcgagatgtttcactac
agcaaatctattgccgagcaattgcatgaagcggaagcggtattcacacaaatgaagggg
ctggataaaggcgagctgcgtatcgccgttgcctctactgccaattattttgctacgcag
ttgttagcgcatttttgtcaggcgcaccccgatattgtggtgcatctggatgtggccaac
cgtgctgaactgctggcgcaaatggaacagaatagtctggatcttgcggtaatgggacag
ccgccagaaggccatgatctagtcgccgagtcgttcatggaaaatccgctggtagtcatc
gccccgcccacgcatcccctgcaaggacaaacgcagataccggcatccaagctcgcaggt
gaaaccatgatcgcacgcgaagcaggctcaggtacgcgtagcgcgtcagagcgctatttt
cagcaacatcatatcaagccgcgtacggggctggtaatgaataccaatgaagcgattaaa
caggccgtgcaagcggggatggggctggcagtggtgtcattgcatactgttgccctggag
ctgcaaacgcagcgtttgattaccttggatattgttgacttccccattcgccgccactgg
tttgttgtgcatagacaagataagcgcctgtcgacagcggcattggcgttcaagcagttt
ctgctggcgcaaggggcgagtgtacaaccctga
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