Sulfuriferula nivalis: SFSGTM_00600
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Entry
SFSGTM_00600 CDS
T06628
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sniv
Sulfuriferula nivalis
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sniv03400
]
SFSGTM_00600
Enzymes [BR:
sniv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SFSGTM_00600
DNA repair and recombination proteins [BR:
sniv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SFSGTM_00600
Prokaryotic type
SFSGTM_00600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
BBO99351
UniProt:
A0A809S778
LinkDB
All DBs
Position
65070..66482
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AA seq
470 aa
AA seq
DB search
MNTAIVWLRRDLRLYDHAALYHATRQATRVVVVFIFDTDILADLPRTDRRVEFIWVSLVA
LKSELEAHGSSLIVRHGRAVELIPQLAAEFQADAVFCNRDYEPQAIARDAQVGNQLQQDG
RALHSYKDQVIFECDEVLTQAGKPFGVFTPYKNAWLKRLTPFYLQAYPVRTETYASMPAQ
PMPSLAELGFVRTNLTQLPVKHGSEGAAQTWQDFQTRIDSYQDARNFPAIKGPSYLSVHI
RFGTLSIRQLANYAYHHGGAGAETWLSELIWREFYQQVLWHHPQLAAGQTYKADFNDIDW
PNPDGHFAAWCEARTGYPLVDAAMRQLNKTGYMHNRLRMVAAAFLVKDLHVDWRLGEAYF
AQHLIDFDLAANNGGWQWSASTGCDAQPWFRIFNPITQSEKFDPEGKFIKRYLPELAALP
AKYIHAPWLLTSAQQQMYHVRIGVDYPPPIVDHSVARGVTLVLFKSVTGG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgcaatagtctggctgcgtcgtgatttacgtttgtatgatcatgcggctttg
taccatgccaccaggcaagcaacacgggtggtcgtcgtgttcatttttgataccgatatt
ctcgctgatttaccccgcacagatcgtcgagtggaattcatctgggtgagcttggttgcg
ctcaaatccgagctggaagcgcacggcagcagcctgatagtacgccatggacgcgcagtc
gagctgattccgcaattagcggctgaatttcaggccgatgccgtgttctgcaaccgcgat
tacgagccgcaggcgatagcgcgtgatgcgcaggtgggtaaccagttacagcaagatggc
cgtgcactgcacagctacaaagatcaggtgatatttgaatgtgatgaggtgctgactcag
gctggcaaaccctttggcgtattcactccctataaaaatgcatggctcaaacgcctcaca
ccattctacctgcaagcgtatcccgtacgcaccgaaacatatgcaagcatgcccgcacaa
cccatgcccagtctggctgaactcggctttgtccgaaccaatttaacccaactgcctgtt
aaacacggcagtgaaggcgcggcgcaaacctggcaggatttccagacacggatagacagt
taccaggatgcacgtaatttccccgcgatcaaaggtccatcgtatttatccgtgcatatc
cgcttcggcacgctgtccatacggcaattggcgaattacgcctatcatcacggcggagct
ggtgccgagacctggctgtccgagctgatctggcgggaattctatcaacaagtgctatgg
catcacccgcaactcgccgctggtcagacctataaagccgattttaatgacatagactgg
cccaatccagacggccattttgccgcatggtgcgaggcgcgcacaggctatccgctggtt
gacgcggcgatgcggcagctgaacaagaccggctacatgcacaaccgcctacgcatggtg
gccgccgcatttctggtgaaagacctgcacgtcgattggcgtttgggtgaagcgtatttt
gcccagcacctgatagatttcgaccttgcggcaaacaacggcggctggcaatggagcgca
tccacaggctgcgatgcccagccctggtttcgtatcttcaatcccatcacccaatcagag
aaatttgacccagaaggtaagtttattaaacgctatctgcctgaactggcagccctcccc
gccaaatacatccacgctccctggctgctcacgtcggcacagcagcaaatgtaccatgtg
cgcattggtgtcgattatcccccgccgatagtcgatcattccgtagcacgtggagtgacg
ctggtgttgtttaagtcggtaacgggtggttaa
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