Sulfuriferula nivalis: SFSGTM_01960
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Entry
SFSGTM_01960 CDS
T06628
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sniv
Sulfuriferula nivalis
Pathway
sniv00521
Streptomycin biosynthesis
sniv00523
Polyketide sugar unit biosynthesis
sniv00541
Biosynthesis of various nucleotide sugars
sniv01100
Metabolic pathways
sniv01110
Biosynthesis of secondary metabolites
sniv01250
Biosynthesis of nucleotide sugars
Module
sniv_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SFSGTM_01960 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SFSGTM_01960 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SFSGTM_01960 (rfbC)
Enzymes [BR:
sniv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SFSGTM_01960 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
PepX_C
Motif
Other DBs
NCBI-ProteinID:
BBO99487
UniProt:
A0A809RZ53
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All DBs
Position
complement(201055..201597)
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AA seq
180 aa
AA seq
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MNIIPTEIPDVLIIEPKVFGDERGFFYESYNRKVMTAAGIPDDFVQDNHSRSARGVLRGL
HYQTQHTQGKLVRVISGSVYDVAVDLRKSSPTFGKWVGVELSAENKRMAWIPPGFAHGFV
VTSDNAEFLYKTTDYWAPEFERSLLWNDPALGITWPLTGEPTIAAKDAAGLPFSQCEVFP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatcccgactgagatccctgacgtgctcatcatcgagcccaaagtttttggt
gacgagcgtggttttttctatgaaagctataaccgcaaggtcatgactgcagcgggtatc
cctgatgactttgtacaggacaaccattcgcgttcggcacgtggcgtgttgcgcggcttg
cattatcagacccagcatacgcaaggcaaactggtgcgggtgattagcggcagcgtgtat
gacgtcgctgtcgatttgcgcaaatcgtcgcctacgtttggcaagtgggtcggggtagag
ctttccgccgagaacaaacgtatggcgtggataccgcccggctttgcccatggctttgtg
gtcacgtcagataatgcagaattcctctacaaaaccaccgattactgggcacctgaattt
gaacgcagcctgctgtggaatgaccctgcactgggcattacctggccgctgacaggcgag
cctacgattgctgcgaaagatgccgctggtttgccattttctcagtgtgaggttttccca
tga
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