Sulfuriferula nivalis: SFSGTM_01980
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Entry
SFSGTM_01980 CDS
T06628
Symbol
rmlB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sniv
Sulfuriferula nivalis
Pathway
sniv00521
Streptomycin biosynthesis
sniv00523
Polyketide sugar unit biosynthesis
sniv00525
Acarbose and validamycin biosynthesis
sniv00541
O-Antigen nucleotide sugar biosynthesis
sniv01055
Biosynthesis of vancomycin group antibiotics
sniv01100
Metabolic pathways
sniv01110
Biosynthesis of secondary metabolites
sniv01250
Biosynthesis of nucleotide sugars
Module
sniv_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SFSGTM_01980 (rmlB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SFSGTM_01980 (rmlB_1)
01055 Biosynthesis of vancomycin group antibiotics
SFSGTM_01980 (rmlB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SFSGTM_01980 (rmlB_1)
00525 Acarbose and validamycin biosynthesis
SFSGTM_01980 (rmlB_1)
Enzymes [BR:
sniv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SFSGTM_01980 (rmlB_1)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
BBO99489
UniProt:
A0A809SFZ9
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All DBs
Position
complement(202481..203545)
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AA seq
354 aa
AA seq
DB search
MILVTGGAGFIGANFVLDWLAQSDETVINLDKLTYAGNMENLASIADDPRHIFVQGDIGD
SALMTQLLQTHQPRAVINFAAESHVDRSILGPEDFIQTNVVGTFHLLESVRAYWTAMDES
AKSAFRFLHVSTDEVYGSLGPDDAPFTETTPYAPNSPYSASKAASDHLVRAYHHTYGLPV
LTTNCSNNYGPLQFPEKLIPLVMMNAVAGKALPIYGDGLNVRDWLYVGDHCSAIRTVLAH
GKLGEVYNVGGWNEKANIDVVKTICTMLDDLHAGSPVTPHADLITYVKDRAGHDRRYAID
ATKLQRELGWMPSETFETGIRKTVAWYLANQTWVANIASGEYRHWVEKQYGSKA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagtcacaggcggcgcaggctttatcggcgcgaattttgttttagattggttg
gcacagtcggatgagactgttatcaatctggataaattgacttatgcgggcaatatggag
aacctggcgtctatagctgatgatccccgccatatttttgtgcagggtgatatcggtgac
agcgcattgatgacacagttattgcaaacacatcagcctcgtgctgtgattaactttgcg
gctgagagccatgtagaccgctctattctgggacctgaagattttattcagaccaacgtg
gtcggcactttccacctgctggagtcagtgcgcgcttactggacggcaatggacgaatcg
gctaaatccgcatttcgttttttacatgtttcaactgacgaagtttacggttcgctcggc
cctgatgatgcaccatttactgaaactacgccttatgcgccgaacagcccgtactctgct
tccaaagccgcttctgaccatctggtacgcgcttatcatcacacttacggcttgcctgta
ctgaccaccaattgctctaacaattacggcccgctgcagttcccagaaaaactcatcccg
ctggtgatgatgaatgcggttgctggcaaggcgctgcctatttatggcgatggcttgaac
gtgcgcgactggctgtatgtaggcgaccattgcagcgcaatccgcaccgtgctggcgcat
ggcaagctaggagaagtctataacgtcggtggctggaacgagaaagccaatatcgatgtt
gtaaaaaccatctgcaccatgttggatgacctgcacgcaggctctccagttacaccgcat
gctgatttgatcacctatgtgaaagaccgcgccggccacgaccgccgctacgccatcgac
gccaccaagttacagcgcgaactgggctggatgccgagcgagacatttgagactggcata
cgcaaaactgtcgcctggtatttggcgaatcagacatgggtagccaatatcgccagcggt
gaatatcgccactgggtagaaaaacaatatgggagcaaagcatga
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