Sulfuriferula nivalis: SFSGTM_04550
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Entry
SFSGTM_04550 CDS
T06628
Symbol
nifA
Name
(GenBank) nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
sniv
Sulfuriferula nivalis
Pathway
sniv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFSGTM_04550 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sniv03000
]
SFSGTM_04550 (nifA)
Transcription factors [BR:
sniv03000
]
Prokaryotic type
Helix-turn-helix
Other families
SFSGTM_04550 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
AAA_16
GAF_3
bpMoxR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BBO99746
UniProt:
A0A809SC99
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Position
441609..443234
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AA seq
541 aa
AA seq
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MAKTLDVNRRLELSTIYEVGKILSSSLDLSKTFREVLNLLSINLDTRRGMISLLQESGEL
HLIGASGLSADEFKRGRFNSGEGVTGRILQTGMPVVVHDISKEPLFLNRTGSLDEVATHP
IAFIGVPIKAGSETIGVLSIDRLAEKQGQKFQDDVQLLTMVANLIGQVVRLNQTVTADRA
LLLQEQQRLKSELHGKYSLDNVVGYSKPMQEVFAQVHQAAPGNATVLLRGESGTGKEVIA
RGVHFLSPRKDGPFIKVNCAALTETLLESELFGHEKGAFTGAQAERKGRFEQAHGGTLFL
DEIGDISPAFQAKLLRVLQEREFERVGGNRSIKVNVRLITATNRNLEQAVSKGEFRADLY
YRINVVSIFLPPLRDRREDIPYLVERFLSKFNQENKRKLTLSPESMQVLVNCYWPGNVRE
LENCVERTATMARTSVVREVDFPCQHAKCLTQTLHGDVVPIPIVIQPVHAEKKPAITDSA
SHEHVVSEPVAVSPPSTERERLIWALEQCGWVQAKAARLLNISPRQMGYALLKYNIEVKK
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaacactggatgtaaataggcgtttggagttgtccaccatttatgaagttggc
aaaattctgagctcttcgctcgatttgtccaagacgttccgtgaggttttaaatctgtta
tccattaacttggatacgcgtcgagggatgattagtttgttgcaagagtcaggtgagttg
catttaattggtgcaagcggcttgtcggcggatgaatttaagcgcggacgttttaactct
ggggaaggtgtaacaggtcgtatcctgcaaacgggtatgccagtcgttgtgcacgatatt
tccaaggagccgctttttctcaatcgtacaggctcgctagacgaagtagcaacccatcct
attgcttttattggtgtgccgattaaggctggatcagaaacgatcggtgtgttgagtata
gatcgcttggcagaaaaacagggtcaaaaatttcaggatgatgttcagctattgacaatg
gtggctaatctgattgggcaggttgtgcgtttgaaccaaactgtaacggcagatcgagca
ctactactgcaggagcagcaacgtctgaaaagcgaattgcatggtaaatacagtctagat
aatgtagtaggctactccaagcccatgcaggaagttttcgcgcaagtgcatcaggccgcg
cctggaaatgctactgtgttactgcgtggtgagagcggtactggtaaggaagtcattgct
cgtggtgtacattttctcagcccacgtaaggacggcccctttattaaagttaattgtgct
gcgttgactgaaaccctactcgaatctgaattgtttggccatgaaaaaggcgctttcacg
ggtgcacaagctgaacgtaagggacgctttgagcaagctcacggcggaacgctgtttctg
gatgagatcggcgatatttcgcccgcatttcaggccaagctgttgcgtgtattacaggag
cgagaatttgagcgcgttggtggtaatcgttccataaaggtcaatgtacgtttgattact
gcgactaaccgcaatctggaacaggcggtgtctaagggtgagtttcgggctgatctttat
taccgcatcaatgtagtaagtatattccttccaccgctgcgtgaccggcgcgaagatata
ccttatctggtggaacgttttctcagtaaatttaatcaagaaaacaagcgcaaacttact
ttgtcgcctgagtctatgcaagtgctggttaactgttactggccaggtaatgtgcgcgaa
ttagaaaattgtgtagagcgtacagctactatggcacgtaccagtgttgttcgcgaagtc
gactttccttgtcagcatgccaaatgtctcactcagacactgcacggcgatgtcgtgcct
attcccattgtcattcaacctgtgcacgctgaaaagaagcctgcgataactgatagtgcc
agtcatgagcatgtggtttctgaacctgttgccgtatcgcctccatccactgagcgcgaa
cggttgatatgggcactggaacaatgtggttgggtacaggcgaaagcggcacgtttgctt
aatatttcaccaaggcagatgggttacgcgttattgaaatacaacatagaagtgaagaaa
ttctga
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