Sulfuriferula nivalis: SFSGTM_05420
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Entry
SFSGTM_05420 CDS
T06628
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sniv
Sulfuriferula nivalis
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sniv03009
]
SFSGTM_05420
Enzymes [BR:
sniv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
SFSGTM_05420
Ribosome biogenesis [BR:
sniv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SFSGTM_05420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Motif
Other DBs
NCBI-ProteinID:
BBO99833
UniProt:
A0A809RG33
LinkDB
All DBs
Position
527404..528681
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AA seq
425 aa
AA seq
DB search
MNTNELQPPLRQLLKRAAVAIDAVVHKGQNLNKIMAAQPLAGRATVQDMCYASLREYGEL
AAMRDALLTKPLTDSVVACLLVVALRQVRARPDATHTVVNEAVEAAAAVQPWARGLANAV
LRNYLRQVDSLAEKLASNPVANWNYPQWWIDKVTLAYPQHWQALLTAGNQHPPMTLRVNT
QHGSTLNYLECLQDEGITAQQVGDSALQLNQPCAVTALPGFATGRVSVQDAGAQLAAILL
DAQDGQRVLDACAAPGGKTGHILELADVQLTALDNDESRLVRVRENLARLQLNATLLVGD
AAQPGRWWDGVAYDRILADVPCSASGVVRRHPDIKWLRRPDDIAFFAVQQAKILTALWSC
LAVGGKLLYATCSIFPEENQQQVDAFLACHTDARQLSLAGDWVTPGQLLVNDQHDGFFYA
LLEKI
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaatgaattgcagccgccactcagacagctgttgaaacgagctgcggtggcg
attgatgcggtggtgcataagggtcaaaatctgaacaagattatggcagcacagcctctg
gctggtcgcgcgacggtgcaggatatgtgttatgccagtctgcgtgagtatggcgagctg
gcagcaatgcgcgatgcattgttgaccaagccattgaccgacagtgtggttgcgtgtttg
ttggtggtcgcattgcgtcaggtgcgtgcacgtccagatgcgacacatacagttgtgaac
gaggcagttgaagccgcagccgcagtacagccttgggcgcgcgggctggcaaatgcggta
ttgcgtaactatttgcggcaagttgatagcctggcggaaaagctggcaagtaacccggta
gcaaattggaattatccgcaatggtggatagataaagtgacgctggcatatccgcaacat
tggcaagcattattgacagccggtaatcagcatccaccaatgacattacgggtgaatacg
cagcacggcagtacgttgaattatctggaatgtttgcaagatgagggcataactgcgcag
caagtgggcgattcggcattgcagttaaaccagccgtgtgcagttacagctttgccagga
ttcgctactggacgagtttcggtgcaggacgcaggtgcgcagctggctgcgattttgctg
gatgcgcaagacggccagcgtgtgctggatgcttgtgcggcgccaggcggtaagaccggg
catattttagagctggcagatgtgcagctgacggctttggataacgatgaatcgcgttta
gtccgtgtgcgcgagaatctggcgcggttgcagttaaatgcaacgttgctggtgggtgat
gcggcccaacctggcagatggtgggatggcgtagcctatgatcgtattttggccgatgtg
ccatgtagtgcatcgggtgtggtacgccgccatcctgatattaaatggctgcgtcgccca
gatgatattgcgttttttgcagtacagcaggcgaagattttaacggcactctggtcatgt
ctggctgtgggtggtaaattgctctacgcgacttgttctattttccctgaagaaaatcag
cagcaagttgatgctttcctggcgtgccatactgatgcacgacaattgtcgctggcaggg
gattgggtaacaccagggcagttattagtgaatgaccaacatgatggattcttttatgca
ttgctggaaaaaatttaa
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