Sulfuriferula nivalis: SFSGTM_06010
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Entry
SFSGTM_06010 CDS
T06628
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sniv
Sulfuriferula nivalis
Pathway
sniv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SFSGTM_06010 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sniv03021
]
SFSGTM_06010 (rpoA)
03400 DNA repair and recombination proteins [BR:
sniv03400
]
SFSGTM_06010 (rpoA)
Enzymes [BR:
sniv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SFSGTM_06010 (rpoA)
Transcription machinery [BR:
sniv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SFSGTM_06010 (rpoA)
DNA repair and recombination proteins [BR:
sniv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SFSGTM_06010 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BBO99892
UniProt:
A0A809S7M6
LinkDB
All DBs
Position
576512..577495
Genome browser
AA seq
327 aa
AA seq
DB search
MQSSTADLLKPRIIDVEAVTPTRARVIMEPFERGYGHTLGNSLRRILLSSMPGAAPTEVS
ISGVLHEYSTIEGVQEDVVDILLNLKGIALKLNDRSEVTLKLSKSEQGLVTAADIEVPHD
VEIVNPDHIIAHLTKGGKIEMEIKVQQGRGYQPVSARRQAEDTQTLGSIKVDSSFSPVRR
VAYAVESARVEQRTDLDKLILDVETNGTIDPEEAVRYAARIMVEQLALFADLKGTPVAAE
APKVPQVDPTLLRPVDDLELTVRSANCLKAENIFYIGDLIQRSENELLKTPNLGRKSLNE
IKDVLASKGLSLGMKLENWPPVGLEKP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtagcactgctgatttattaaagccacgaattatagatgtagaagctgtaaca
ccaacacgtgctcgtgtaattatggagccgtttgaacgtggttatggtcatacactaggc
aattcattaagacgtattttgttgtcatctatgcctggtgcagcaccaactgaagtaagt
atcagtggtgtgttgcacgagtattcaaccattgaaggcgtgcaagaggacgttgttgac
attcttttgaatcttaaaggtatcgcgcttaagcttaacgatagaagcgaagttacgctt
aaattgagtaagtctgagcaaggtttagtgactgctgctgatattgaagtgccacacgat
gttgaaatagtgaacccggatcacattattgcgcaccttaccaaaggtggcaagattgaa
atggagatcaaagttcagcaagggcgtggttaccaaccagtttctgcacgtcgtcaggct
gaagatactcaaactttgggttcaattaaagttgattcatcattcagcccagttcgtcgc
gtggcttatgctgttgaaagcgcccgtgtagaacagcgtactgatctggataagttgatt
ttagatgttgaaaccaatggcactattgatccagaagaagcagttcgttatgctgcgcgt
attatggttgagcaattagcattgtttgctgacttgaagggaactcctgttgctgctgaa
gctccaaaagttccacaggttgatccaaccttgttacgtccagttgatgatttggaactg
actgtgcgttcggcaaattgcttaaaagctgaaaacattttttatatcggtgatttaatt
cagcgtagtgaaaatgaattgttgaaaacaccaaatttaggccgtaaatctttaaatgaa
attaaagatgttttggcttccaagggtctcagcttgggtatgaaactcgaaaactggcca
ccagttgggcttgagaagccttaa
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