Sulfuriferula nivalis: SFSGTM_11950
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Entry
SFSGTM_11950 CDS
T06628
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
sniv
Sulfuriferula nivalis
Pathway
sniv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SFSGTM_11950 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sniv03400
]
SFSGTM_11950 (uvrB)
DNA repair and recombination proteins [BR:
sniv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SFSGTM_11950 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SFSGTM_11950 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_30
AAA_22
Microtub_bd
DUF87
HSA
Motif
Other DBs
NCBI-ProteinID:
BBP00487
UniProt:
A0A809SDC7
LinkDB
All DBs
Position
1175111..1177144
Genome browser
AA seq
677 aa
AA seq
DB search
MIATFPNSPFRLHQPFLPDGDQPQAIAKLVEGINDGLAFQTLLGVTGSGKTYTMAHVIAQ
LGRPAMIMAPNKTLAAQIYAEMREFFPENSVEYFVSYYDYYQPEAYVPARDLFIEKDSSI
NEHIEQMRLSATKALLERKDSIIVATVSAIYGIGDPSDYHQMILHLHQGEKLSQREAIQR
LIAMQYDRNEFEFKRGVFRVRGDVLDIFPAENAEHAVRVSLFDDEVESIRLFDPLTGHLL
QKLPRCTIYPSSHYVTPRSTTLRAIEQIKVELRERLEEYYRDNKLVEAQRLEQRTRFDLE
MMNEMGFCKGIENYSRHLSGRKPGEPPPTLIDYLPAHALMIIDESHVTIPQIGGMYKGDR
ARKENLVNYGFRLPSAMDNRPLRFDEFERIMRQTVFVSATPADYEAQHQGQVVEQVVRPT
GLVDPEIEVRPVATQVDDVLSEITKRTAINERVLVTTLTKRMSEDLTDYLSEHGVKVRYL
HSDVDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLI
QTIGRAARHINGRAILYGDRITNSMRKAMDETERRRIKQTAYNVEHGITPRGVVRGIKDI
IEGAYDMESAQANHKVAQKMASYHAKDEKTLTRELKQVEKDMLTAAKNLEFERAAELRDE
LKRLKSVLFGAAGHDEI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtgattgctacatttcccaatagcccatttcgattgcatcagccttttttacctgatggc
gatcaacctcaggcaattgccaagctggtagagggaataaacgatggtttagccttccag
acgctgctcggtgtgaccggctcgggcaaaacttataccatggcacatgtgattgcacag
ctagggcgcccggccatgatcatggcaccgaataaaaccctggcggcacagatttatgcg
gaaatgcgtgagtttttcccggaaaattcggtcgagtattttgtatcttattacgattac
tatcagcccgaagcttatgtacctgcgcgggatttgtttatcgaaaaagattccagtatc
aacgagcatattgagcaaatgcgtttgtcagcaactaaagctttgctggagcgtaaagac
agcattatcgtagcgacagtttcggcaatttacggtattggcgaccctagtgattatcat
cagatgatattgcacttgcatcagggtgaaaagttgtcgcagcgcgaggccatccagcgg
ctgattgccatgcaatatgacaggaacgaattcgaatttaaacgtggtgtatttcgtgtg
cgtggtgatgtgctggatatttttcctgctgaaaacgcggaacatgcggttcgggtgagt
ttatttgatgatgaggtcgaaagcattcggctatttgacccgctgacagggcatctgctg
caaaaactgccacgttgcacgatatatccctccagtcattatgttaccccgcgcagtaca
accttacgggcgatagagcagatcaaggtggaattgcgtgagcgactggaagagtattac
cgcgacaataaactggttgaagcgcaacggctggaacaacgtacccgttttgatctggaa
atgatgaacgaaatgggcttctgcaagggcatcgagaattactcgcggcatttgtcaggg
cgtaagccgggtgagccgccaccgacattgatcgattatttgcctgcccatgcgttgatg
attatcgacgagtcgcacgtcacgattccacagataggcgggatgtataaaggggacagg
gcgcgcaaggaaaatctggtgaattatggttttcgtttgccttcagcgatggataatcgt
ccgctacgatttgacgaatttgaacgcattatgcgccagactgtgtttgtttccgctacg
ccagctgactatgaggcacaacatcaggggcaagtggtggagcaggtggtgcgtcctact
ggattggtcgaccctgaaattgaggtgcgtccggtggcaacacaggttgatgatgtgttg
tcggaaattaccaagcgtaccgccatcaatgagcgcgtgctggtgacgacgctgactaaa
cgtatgtctgaagatttgacggattatttgtcagagcatggtgtgaaggtgcgctatttg
cattcggatgtggatacggtagagcgtgtcgagattattcgtgatctgcgactgggcgtg
tttgacgtgctggtcgggattaacttgctgcgagaagggcttgatataccagaagtatcg
ctggtggcgatactggatgctgataaagaaggctttttgcgctcagagcgctcattgata
cagactataggtcgcgccgcacgacacattaatggacgtgcgattttgtacggtgatcgt
attaccaattccatgcgtaaggcgatggatgaaactgaacgccgtcgtatcaagcaaact
gcgtacaacgtagagcacgggattacgccgcgcggtgtggtcaggggtattaaagacatc
atcgagggtgcgtacgatatggaaagcgcacaggccaaccacaaagtcgcacaaaaaatg
gcgagttatcatgccaaagatgaaaaaacgctgactagggaattgaagcaggtggaaaaa
gacatgctcaccgctgcgaagaatttggaattcgaacgtgcagcggaattgcgtgacgag
ttaaagcgtttgaagtcagtgctgtttggcgcagctgggcatgacgagatttaa
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