Sulfuriferula nivalis: SFSGTM_22700
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Entry
SFSGTM_22700 CDS
T06628
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sniv
Sulfuriferula nivalis
Pathway
sniv00541
Biosynthesis of various nucleotide sugars
sniv01100
Metabolic pathways
sniv01250
Biosynthesis of nucleotide sugars
Module
sniv_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SFSGTM_22700 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sniv01005
]
SFSGTM_22700 (kdsA)
Enzymes [BR:
sniv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
SFSGTM_22700 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
sniv01005
]
Lipid A
SFSGTM_22700 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBP01562
UniProt:
A0A809SAF0
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Position
complement(2384825..2385664)
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AA seq
279 aa
AA seq
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MKLCGFEVGLEQPLFLIAGPCVVESRQMAMDTAGQLKEICAELNIPFIYKSSYDKANRSS
GTSYRGPGRDAGLQILADVKREIGVSILTDVHSIEEIAEVAAVVDVLQTPAFLCRQTDFI
HAVACSGKPVNIKKGQFLAPWDMKNVVDKAKAANGGQDNIMVCERGVSFGYNNLVSDMRS
LMVMRETGCPVVFDATHSVQLPGGQGNVSGGQREFVPVLARAAVSAGVAGVFAETHPDPA
CALSDGPNAWPLGRMKELLYTLKEIDALVKQRGFIEHTL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatgtggatttgaagttggcttagaacagcctctgtttttgattgctggtcct
tgtgttgttgaatcccgccaaatggcgatggatacagcaggacagctgaaagaaatttgt
gctgaattgaatataccttttatctacaaatcgtcgtatgacaaggcgaatcgtagttcg
ggcacatcataccgcggccctggtcgtgatgcgggtttgcagatactggcagacgtaaag
cgtgaaatcggcgtatccatcttaactgacgtgcacagcatagaagaaattgctgaagtc
gcggctgtggttgatgtgttgcaaacgcctgcgttcctgtgccgccagaccgattttatc
catgcggtagcgtgttcaggcaagcctgtaaatatcaaaaaggggcagtttctggcacct
tgggatatgaaaaatgtagtggataaagctaaagcagcaaatggtggccaagataacatc
atggtatgtgagcgtggtgtgtcgtttggttataacaatctggtatcggacatgcgttca
ttgatggtgatgcgtgaaactggttgtccggtcgtgtttgatgcgacgcattcggtgcag
ttgcctggtggtcagggcaatgtttcgggtggtcagcgtgagtttgtgcctgtattggcg
cgtgcggcagtgtcagcaggtgtggcgggtgtgtttgcagaaacccatccagatcctgca
tgtgcactgtcagatggtcccaatgcctggccgttgggacggatgaaagaattgttgtat
acgttaaaagaaattgatgcgttggttaaacaacgtggttttattgaacatacgctctaa
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