KEGG   Sulfuriferula nivalis: SFSGTM_23510
Entry
SFSGTM_23510      CDS       T06628                                 
Symbol
clpB_2
Name
(GenBank) protease associated ATPase ClpB
  KO
K11907  type VI secretion system protein VasG
Organism
sniv  Sulfuriferula nivalis
Pathway
sniv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sniv00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SFSGTM_23510 (clpB_2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sniv02044]
    SFSGTM_23510 (clpB_2)
Secretion system [BR:sniv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SFSGTM_23510 (clpB_2)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 AAA_16 Clp_N nSTAND3 AAA_25 Zeta_toxin T2SSE SLFN-g3_helicase AAA_7 ResIII ATPase_2 TniB Sigma54_activat NACHT CbiA DUF815 NTPase_1 Hpr_kinase_C
Other DBs
NCBI-ProteinID: BBP01643
UniProt: A0A809SA00
LinkDB
Position
complement(2469172..2471808)
AA seq 878 aa
MSINLKTLITKLNDTCRLATERAANICISRGHYEVDIEHLFLALLEQDKSDISLILRRNN
IDPRQLAADLQAETEQFQSGNSRTPVFSPNLSKLFEHAWLIASLDNASASVRSGQLLLAL
LTAPDLQQLAWRSSKLFSRIALDALKHDLPALTTGSQETTVNDTAASADAEIVSQPAAGK
TPALDQYTTNLTQRAREGKLDPVIGRDAEIRQAIDILLRRRQNNPILTGEPGVGKTAVVE
GLALRIAAHDVPEVLDNVELHTLDMGLLQAGASVKGEFENRLKSVIDEVKKSPRPIILFI
DEAHTLIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKTYFEKDAALARRFQVVK
IEEPDEATACAMLRGMLPHMEQHFNVRIQDQAIIDAVRLSHRYISGRQLPDKAISVLDTA
CAKVALAQNATPAPLETVTKRLEHLAAEISQLSRETRTSGQHQVRLDACIAQRDSLLAEQ
AALAQRWHEERALSQQIQALRGQLETGEHAPTAQQQSELAALTQQLQQLQGEIPLTAVQV
DGHTVAQVISSWTGIPLGNMLKDDLQQVLDLPARLHKRIIGQRHAIATLAQRIRTSRAGL
DDPNKPQGVFLFAGTSGVGKTETALALADALYGGEHKLITINLSEYQEAHSVSGLKGSPP
GYVGYGTGGILTEAVRRNPYSVVLLDEAEKAHPDVLELFFQVFDKGRMEDAEGREIDFRN
TFIILTSNVGASSLMQACLNKTAKELPSVDELDNLIRPQLVKVFKPAFLGRLQVIPFYPI
DDIDLAEIIRLKLQRVVDRIATQHQIRLDYSESVIDTVLNRCTEVDSGARNVDSILNGSL
LPELAQHLLTHMAEGKQIDRIKVSSLKSGQFKYQMSGV
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgagcatcaatcttaaaacgctgatcaccaaacttaacgacacgtgccgtttagcaacc
gaacgggcagccaatatatgtatcagtcgcgggcattatgaagtcgatattgagcattta
tttctggctttgctggaacaggataaaagtgatatcagcctgatcctgcgccgcaacaac
atagacccgcgccagcttgccgcagacctgcaggcagaaaccgaacagttccagagcggc
aacagccgtacacccgtgttttcgcctaacctgtccaaactgtttgagcacgcctggctc
atagcgtcactggataatgctagcgcgagtgtacgtagtggtcagttgctattggcactg
ctgacagcacctgatttacaacaactggcatggcgtagctccaagctatttagtcgtatc
gcgctggatgcgctcaagcatgatttacccgcgttgaccacgggttcacaagaaaccacc
gtaaatgatactgctgcaagtgctgatgccgagatcgtatctcaacccgcagcaggaaaa
accccagcgctcgaccaatacaccaccaacctcacccagcgcgcacgcgaaggcaagctt
gatccggttatcgggcgcgatgctgaaatccgtcaggctattgatatcctgctacggcgc
aggcagaacaaccctatacttactggcgagccaggggtaggtaaaactgcagtagtagaa
gggcttgcattacgcatagcggcgcatgacgtacctgaagtgctggacaacgttgagctg
cacacattagacatggggctgctacaggcaggcgcatccgtaaaaggcgaatttgaaaat
cgccttaagtcggtcatcgacgaagtcaagaaaagcccgcgccctatcattctgtttatc
gacgaagcccatacgctgataggcgcaggtgggcaagcggggcagaacgatgcggccaac
ttgctcaagcctgccttggcgaggggtgagttgcgtactatcgcggctacgacctggagc
gaatataagacttactttgagaaagatgccgccctcgcgcgtcgctttcaggtcgtcaag
atagaagagccggacgaagccactgcttgcgccatgctgcgcggtatgttgccgcatatg
gaacaacacttcaacgtgcgcatacaggatcaggccattattgatgctgtgcgtctgtcg
catcgttacatcagcggtcgtcagctgccagacaaagccatcagcgtactcgacaccgct
tgtgccaaagtcgcactggcgcagaatgctactcccgcgccgctggaaaccgttaccaaa
cgactggagcatcttgcagcagaaatcagccagctcagtcgtgaaactcgcaccagtggt
cagcatcaggtacggctggatgcttgtattgcacaacgtgacagcctgcttgccgaacag
gctgcattggctcagcgctggcatgaagaacgtgcattgtcacaacaaatacaagcattg
cgtggccagcttgaaactggcgaacatgcaccaacagcacaacagcaaagtgaactagcc
gctttgactcagcagctgcaacaactgcaaggtgaaattcctctcaccgccgtgcaagtc
gatggtcataccgttgcccaggttatttccagctggacgggcataccactgggcaacatg
ctcaaagacgatctgcaacaagtgctggatttgccagcgcgtttgcataaacgcatcatc
ggccagcgtcacgccatcgccacgctcgcgcaacgcatacgcacctcgcgcgcaggattg
gacgaccctaataagccgcaaggtgtattcctgtttgcagggacatcgggtgtgggtaaa
accgagaccgcgctggcactggctgacgcattgtatggtggcgaacataaactcatcacc
atcaacctcagtgaataccaggaagcacatagcgtctccggtcttaaaggttcgccacca
ggttacgtcggttatggcacgggcggtatcctcactgaagctgtgcgccgcaatccttac
agcgtggtgttgctcgatgaagcagaaaaagcccatcccgatgtactggaactgttcttc
caggtgtttgacaaaggtcgcatggaagatgccgaaggtcgtgaaatcgacttccgtaat
actttcatcatccttaccagtaatgtgggtgcatccagcctgatgcaagcctgtctcaat
aaaacagccaaagagttgccctcagtggatgagctggataatcttatacgtccgcaactg
gtaaaagtgttcaaacctgcatttctcggacgtttgcaggtgataccgttctaccctatt
gatgacattgatctggctgaaatcatccgcctcaagctgcaacgtgtggttgatcgcatc
gccactcagcatcagatcaggctggattacagcgaaagtgtgatcgacaccgtgcttaac
cgctgcaccgaagttgattcaggtgcgcgcaatgtggatagcatactcaacggcagcctg
ttgcccgaattggcgcagcatttactcacgcacatggctgaaggtaagcagatagaccgc
atcaaagtcagcagcctcaaatcaggacaattcaaatatcaaatgagtggggtttga

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