Sulfuriferula nivalis: SFSGTM_25420
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Entry
SFSGTM_25420 CDS
T06628
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing)
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sniv
Sulfuriferula nivalis
Pathway
sniv00220
Arginine biosynthesis
sniv00240
Pyrimidine metabolism
sniv00250
Alanine, aspartate and glutamate metabolism
sniv01100
Metabolic pathways
sniv01110
Biosynthesis of secondary metabolites
sniv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SFSGTM_25420 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SFSGTM_25420 (carB)
00220 Arginine biosynthesis
SFSGTM_25420 (carB)
Enzymes [BR:
sniv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SFSGTM_25420 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
Epimerase
Motif
Other DBs
NCBI-ProteinID:
BBP01834
UniProt:
A0A809RM11
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Position
complement(2667984..2671190)
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AA seq
1068 aa
AA seq
DB search
MPKRTDLHSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPDM
ADVTYIEPITWQVLEKIIEKERPDAVLPTMGGQTALNCALDLAKHGVLEKYKVEMIGASR
EAIDMAEDREKFKQAMTRIGLASPHSMIAHSMEEALQVKAVLGYPTIIRPSFTMGGTGGG
IAYNREEFVEICERGLEASPTKELLIEESLIGWKEYEMEVVRDRNDNCIIVCSIENLDPM
GVHTGDSITVAPAQTLTDREYQILRNASIAVLREIGVETGGSNVQFGINPVDGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIP
RFAFEKFPQANDRLTTQMKSVGEVMAMGRTFRESLQKALRGLETGMDGLDSLSLDRDIIE
AEIGNPGPERLWYVADAFRIGMSMDEVFAFTKIDPWFLVQIQALVADEASLQGKQLADLD
ATEIRRLKRNGFADRRLAKLLNSDKNEVRARRWELDIHPVYKRVDTCAAEFSTSTAYMYS
TYEEECESRPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPETV
STDYDTSDRLYFESLTLEDVLEIVRIEKPVGVIVQYGGQTPLKLARELEAFGTPIIGTTP
DMIDCAEDRERFQQMLMGLGLKQPPNRTARSAEEAMAGAAEIGYPLVVRPSYVLGGRAME
IVRAEEDLQRYMREAVKVSNDSPVLLDRFLNDAIEIDVDAVSDGVDVVIGGIMEHIEQAG
VHSGDSACSLPPYSLSAEIQDEIRRQTVAMAKALNVVGLMNVQFALQGETVYVLEVNPRA
SRTVPFVSKATGVQLAKVAARCMAGVSLAAQGITREVVPPYYSVKEAVFPFAKFQGVDTL
LGPEMKSTGEVMGVGKTFAEAFVKSQLAASVKLPKDGRAFISVRNADKQKILEIGAQLLA
LGFELYATRGTASALSAGGMAVTVVNKVAEGRPHVVDMIKNKEISFIVNVVDDKRAVRDS
VEIRRAALAHRVTYYTTLAGARAACIGMQAMSELNVYDLQGLHGQLNA
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgtacagacttacatagcatactgattattggtgccggccctattgtcata
ggccaggcgtgtgaatttgactattctggcgcgcaggcgtgtaaggcgctgcgtgaagaa
ggttacaaagtcatactggtgaactctaacccagcgactatcatgactgacccagacatg
gccgatgtaacctacatcgagccgattacctggcaggtgctggaaaaaatcatagaaaaa
gagcgcccagacgctgtattgcctactatgggcggtcaaactgcactgaattgtgcgtta
gatttagctaaacatggtgtgctggaaaaatacaaagttgaaatgataggtgcgtcgcgt
gaagctatcgacatggctgaagatcgcgaaaaattcaagcaggcaatgacgcgtattggt
ttggcttcaccgcattccatgatagcgcatagcatggaagaggcattgcaggttaaggcg
gtgttaggctatcccacgattattcgtccgtctttcacgatggggggtacgggtggaggt
attgcttacaaccgggaagagttcgttgagatttgcgaacgtggtctggaagcctcacca
actaaagagttgttgatagaagagtcactcataggctggaaagaatacgagatggaggtg
gtgcgtgatcgtaatgataattgcatcatcgtttgctccattgaaaacttggatcctatg
ggcgtgcataccggtgattcgattaccgttgcccctgcgcagacattgactgaccgtgaa
tatcagatattgcgtaatgcttcgattgcggtattgcgtgagatcggcgtggaaacaggc
ggctctaacgtacagtttggtattaacccagttgatgggcgcatggtggttatcgagatg
aatccgcgcgtgtcgcgttcgtctgctttggcttcgaaagccacaggtttcccgattgca
aaaatcgctgcaaaactggcggtggggtatacgctggatgaattgcagaatgatattact
ggcggcgcaacgccagcgtcatttgagcctagtatcgattacgtagtcactaaaatccca
cgttttgcttttgagaaattcccgcaagctaatgatcgtttaaccacgcagatgaaatct
gtgggtgaggtgatggcgatggggcgtactttccgtgaatcattgcaaaaagcattgcgt
ggtttggaaacgggtatggatggactggattctctcagtttggatcgtgacattattgaa
gcggaaatcggtaatcctggccctgagcgtttgtggtacgttgctgatgcgttccgtatc
ggtatgagtatggatgaagtgtttgctttcaccaaaattgatccttggttcttggtgcag
atacaggcgctggtagctgatgaagcgagtttgcaaggtaaacagttagctgatctggat
gcgactgaaattcgtcgtttgaagcgcaatggctttgctgatcgtcgtttggctaaattg
ctaaacagtgataagaatgaagtccgtgcgcgacgctgggagctggatattcatcccgta
tataaacgggtggatacttgtgcggccgagttttcgacgtctactgcttatatgtattca
acctatgaggaagagtgcgaatcacgtccaactgatcgtaaaaaaattatggtgctgggt
ggtggtccaaaccgtatcggtcaaggtatcgaatttgattattgctgcgtacacgcagcg
ctggcgatgcgtgaagatggttatgaaaccattatggttaactgtaatccggaaactgtt
tctaccgattacgatacatcagacaggttgtatttcgagtcgttaactttggaagatgtg
ttagaaatcgtgcgcatcgaaaaaccggtaggtgtgattgttcaatatggtggccaaaca
ccattgaaactggcgcgcgagctggaagcctttggtacaccaattattggtactactcca
gacatgatagattgtgcggaagaccgtgagcgtttccagcaaatgttgatggggttgggc
ctgaaacagccgcctaaccgtactgcgcggtcagctgaagaagcgatggcaggtgctgcg
gaaattggttatccgttagttgtgcgtccttcctatgtattaggtgggcgggcgatggaa
atcgtacgtgctgaagaagatttgcaacgctatatgcgtgaagcagttaaagtctccaat
gattcacctgtgctgttggacaggttcttgaatgatgcgattgaaatagacgtagatgca
gtgtccgatggtgtggatgtcgttattggcggtatcatggaacatattgaacaggcgggt
gttcattctggcgattctgcctgttcattgcctccatatagcttgtcagctgagattcag
gatgagatacgccgccaaactgtagcgatggcaaaagcattgaatgtggtgggcttgatg
aatgtgcagtttgctttgcaaggcgagactgtttacgtgctggaagtgaatccacgcgct
tcgcggactgtgccttttgtatccaaggcaacaggtgtgcaattggctaaagtggcggct
cgttgtatggcaggcgttagcttggcagcacagggaattacacgtgaagtcgttccaccg
tattattcagttaaggaagctgtgtttcctttcgccaaattccagggtgttgataccctg
cttggacctgagatgaagtctactggtgaggtcatgggcgtgggcaagacatttgctgaa
gcatttgtgaagtcacaacttgccgccagtgtgaaactgcctaaagatgggcgtgccttt
attagtgttcgtaatgcggataaacagaaaatactggaaatcggtgcgcagttactggca
ttagggttcgagttatatgcaacacgtggtaccgcgtctgcattaagtgcgggtggcatg
gcggtgactgtagtgaataaagttgctgaaggtcgtccacatgtggtggatatgattaaa
aataaagagattagctttatcgttaatgtggtcgatgataaacgtgctgtgcgtgattct
gttgaaatacgtcgtgctgcgttagcgcatcgagttacctattacactactttggcaggt
gcgagagcagcatgtataggtatgcaggcgatgagtgaattgaacgtgtatgatttacag
ggattacatgggcaacttaatgcctga
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