Sulfuriferula nivalis: SFSGTM_28890
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Entry
SFSGTM_28890 CDS
T06628
Name
(GenBank) peptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sniv
Sulfuriferula nivalis
Pathway
sniv00550
Peptidoglycan biosynthesis
sniv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SFSGTM_28890
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sniv01002
]
SFSGTM_28890
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sniv01011
]
SFSGTM_28890
Enzymes [BR:
sniv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SFSGTM_28890
Peptidases and inhibitors [BR:
sniv01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SFSGTM_28890
Peptidoglycan biosynthesis and degradation proteins [BR:
sniv01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SFSGTM_28890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
BBP02181
UniProt:
A0A809RTH0
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All DBs
Position
complement(3038814..3039965)
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AA seq
383 aa
AA seq
DB search
MQLFSSSRVVGALLCGVLLKTSAIAAPLPAIPDAPDVDARNYVLVDPASRQILAAREAEQ
KVPPASLTKLMTAYITLQSLAQGRLKLDQSVPVSVAAWKAGGSTMFLQPDLPATVEQMIQ
GMVVVSGNDAAVALAETIAGNADSFVQMMNATAAQLGMTHTHFDNVDGLPTPTHLVSAHD
IAILTEDIIRQYPQYLHYFGEKSFTYNKVTQANWNPLVFSDTTVTGMKTGHTDEAGYCLD
ATATRKGRHLIAVVLGSSSRTGSAKAAEALLNYGYNFFETRRAYSASQAIVTVRKNQASP
AQITIGSLKDVWVSVPNGRYPQLTSSATVFQQIPLPLKRGQRVGTLILSMDGKEVTRVPL
VSLQNIEKAGWFGRIVNIVRGLF
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcagttattttcttcgtcgcgtgttgttggtgcgttattgtgtggtgtgttgctgaaa
actagcgctatcgcggccccccttcctgctatccctgatgcaccggacgtagatgcacgt
aattacgttttagtggacccagcatctagacaaatattggctgctcgtgaagctgagcag
aaagtcccacccgccagtctgaccaaattgatgactgcatatattactttgcagtcattg
gcacaaggtcggttaaaactggatcaatctgttcctgtcagcgtggccgcgtggaaggct
ggcgggtcaactatgttcctgcagcctgatttgcctgcaacggtagagcagatgatacag
ggcatggtagtggtgtctgggaatgatgcggctgtggcgctggctgaaactattgcgggt
aatgcggatagttttgtgcagatgatgaatgcaacagcagctcagctgggcatgacgcat
acccattttgataacgtagatggcctgccaacgccgactcatttagtcagcgcgcatgac
attgctattttgacggaagatattattcgccagtatccacagtatctacattattttggt
gaaaaatcttttacatataataaggtaacgcaagcgaactggaatccgttagtgtttagt
gacactaccgtgacggggatgaaaaccggccatacggatgaggcgggatattgtctggat
gcaactgccacacgtaaaggccgtcatttgattgccgtggtgcttggttctagctcaagg
acagggagtgcgaaagcggctgaggcgttgctaaattatggatataatttctttgaaacg
cgacgtgcctatagtgcgtcccaagcaattgttactgtgcgcaagaatcaggcaagccct
gcccagattacgatcggcagtttaaaggatgtgtgggtgagtgttcccaatggacgttat
cctcaactaacatctagcgcgactgtttttcagcagataccgctaccactgaagcgcggt
cagcgagttggtacgctcattttgagcatggatggcaaggaagttactcgcgtaccattg
gtatcattgcagaatattgagaaggcgggctggtttggacgcattgtgaatattgttcgt
ggcctgttttaa
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