Sphingomonas sp. NIC1: A7E77_01335
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Entry
A7E77_01335 CDS
T04479
Name
(GenBank) TetR family transcriptional regulator
Organism
snj
Sphingomonas sp. NIC1
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_24
HTH_23
HTH_24
HTH_20
HTH_Tnp_ISL3
HTH_31
HTH_Tnp_1
TetR_C_7
DUF3562
HTH_35
Motif
Other DBs
NCBI-ProteinID:
ANC85659
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Position
254841..256100
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AA seq
419 aa
AA seq
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MEQTGADAGETVGAEEQGTKRFRAKRDAILSAAAEAINEQSAKGMTFADVARRVGLNTTS
VTYYFKRKEDLAAAAFEHTLDQLLAMLDDALAQPTPQARVRRYLGLIMDRLARVQRGEDR
AMAVLSDLRASEEPNRTRLLNRWREVFRRTRSLWGPAASRAETDLFGARAHVLLENTFWL
PIWVLRYEPDQYDRIEARLMDVFEHGIAAPHARWAPQPIDLSHEETEPGRAAFLLAATRL
INELGYRGASVQRIAAELNVTKGSFYHHLDAKDDLVIACYRRSFDTISDAQRLADETGGS
HWQRLSSTIATLLDVQFAERAPLLRTTALSGLPAIVRTAMVDRSNRIARRFAGTMMDGIA
EGSIRPVDALVAAQALMALQNAAFDMRKWAGTMPRERAVAMYASTLFFGLFDDRALRDA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaacgggggcggatgccggcgaaaccgtcggggcggaggaacagggcaccaag
cgcttccgggcgaagcgcgatgcgatcctgtccgccgcagcggaggcgatcaacgaacag
agcgcgaagggcatgaccttcgccgacgtggcgcgccgcgtagggctgaacacgaccagc
gtcacctattatttcaagcgcaaggaagacctggcggcggcggcgttcgaacatacgctc
gaccagctgctcgccatgctggacgacgcactcgcccagccgacaccgcaggcacgcgtg
cgccgctacctcggccttatcatggaccggctggcgcgcgtgcagcgcggcgaggatcgc
gcgatggcggtcctgtccgacctgcgcgcgagcgaagagcccaaccgtacccgattgctg
aatcgctggcgcgaggtgttccggcgcacgcgctccttatggggccccgccgccagccgc
gcggagacggacctgttcggggcgcgggcgcacgtgctgctggaaaacaccttctggctg
ccgatctgggtgttgcgctacgaaccggatcagtacgatcggatcgaagcacggctgatg
gacgtgttcgaacatggcatcgctgcgccgcacgcgcgctgggcgccgcagccgatcgat
ctgagccatgaagagacagagccggggcgcgcggcctttctgctggcggcgacgcggctg
atcaacgaactgggctatcgcggcgcatcggtgcagcggatcgcggcggagctgaacgtc
accaagggcagcttctaccatcacctcgacgccaaggacgatctggtcatcgcctgctat
cggcgcagcttcgacacgatcagcgatgcgcaacgactggcggatgagaccggcggcagc
cactggcagcggctgtccagcacgatcgcgacgctgctggacgtgcaattcgccgagcgc
gcaccgctgctgcggacgacggcgctgtcgggcctgccggcgatcgtgcggaccgcgatg
gtcgaccgctccaaccggatcgcgcggcgcttcgccggcacgatgatggacgggatcgcc
gaaggatcgatccgcccggtcgatgcgctggtggcggcgcaggcactgatggccctgcag
aatgcggcattcgatatgcggaaatgggcgggaacgatgccgcgcgaacgcgcggtggcg
atgtatgcctcgaccttgttcttcggcctgttcgacgatcgggcgctgcgcgacgcgtga
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