Sphingomonas sp. NIC1: A7E77_03400
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Entry
A7E77_03400 CDS
T04479
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snj01002
]
A7E77_03400
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snj01011
]
A7E77_03400
Peptidases and inhibitors [BR:
snj01002
]
Cysteine peptidases
Family C82
A7E77_03400
Peptidoglycan biosynthesis and degradation proteins [BR:
snj01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
A7E77_03400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ANC86013
LinkDB
All DBs
Position
complement(669114..670541)
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AA seq
475 aa
AA seq
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MAATILSALPAAAQVAPPTVQPTIQQVPVPASAAAPVVLPQISEAQATQLAALLPADTIA
QGLSLNPRPEDAAAREQLVRDALDHARAVHSGRLAEEDFQRDWGLRPPAYDPLPGFAEAV
RTDRIAAWIASLPPPYAGYDGLKAGLVRYRAIAAAGGWPTLAAGPDLTLGSSGARVIALR
QRLAVEDKDVATSGTTFDAALLEAVRRAQRRYGLNPTGTVAGQTLAALNVPAIARVRQIM
ANMERWRWLPQELPKDRVQVNIAAAVMTVFDGDAPVLSMRAVTGRPGDETPMLSSMIHSV
VINPPWNVPTSIATKELWPKEKKSPGYLKRNGFKVIDGTRLQQQAGDQSALGRFKFDFDN
NFSVYLHDTPSRAKFASFSRLASHGCVRLEKPEQLADLLLKGDPTWTPEAIAAQVQKGET
VRARLAKPVAVYLLYWTAFASGNGQMNFRDDPYGWDAALAAKIEARSARAVLASR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccatcctgtctgcactgcccgcggcggcgcaggtggcgcccccgaccgta
cagcccacgatccagcaggtgccggtgcccgccagtgcggctgcgccggtggtgctgccg
cagatcagcgaagcgcaggcgacgcagctggcggcgttgctgcccgccgacacgatcgcc
cagggactgagcctgaacccgcgtcccgaggacgcggcggcgcgcgagcaattggtgcgc
gacgcgctggaccatgcgcgcgcggtgcattcggggcggcttgccgaagaggatttccag
cgcgactggggcctgcggccgccggcctatgacccgctgccgggattcgccgaagccgtg
cgcaccgaccggatcgcggcgtggatcgcatcgctgccaccaccgtatgccggctatgac
gggctgaaggcgggcctggtccgctatcgcgccattgcggcggcgggcggctggccgacg
ctggcggcgggtccggacctgactctggggtcgagcggtgcgcgcgtgattgcgctgcgc
cagcgcctggcggtcgaggacaaggacgtcgcgaccagcggcaccaccttcgacgctgcg
ttgctggaggcggtgcgtcgggcgcagcgccgctatggcctcaatcccaccggcaccgtc
gccgggcagacgctggcggcgctcaacgtgccggcgatcgcgcgcgtacgccagatcatg
gcgaatatggagcgctggcgctggctgccgcaggagctgccaaaggatcgtgtacaggtg
aatatcgccgccgcggtgatgaccgtgttcgacggcgatgcacccgtgctgtcgatgcgc
gcggtgacggggcggccgggcgacgagacgccgatgctgtcgtcgatgattcacagcgtg
gtcatcaatccgccgtggaacgtgccgacgtcgatcgcgaccaaggagctgtggccaaag
gaaaagaagagccccggttatctgaagcgcaacggcttcaaggtgatcgacggcacccgg
ctgcagcagcaggcgggcgaccagagcgcgctgggccggttcaagttcgacttcgacaac
aatttctcggtctatctgcacgacacgccgtcgcgcgcgaagttcgcgagcttcagccgg
ctcgcgagccatggctgcgtgcggctggaaaagccggagcagctggccgacctgttgctg
aagggcgatccgacctggacgcccgaggcgatcgccgcgcaggtgcagaagggcgagacg
gtccgcgcgcggttggccaagccggtggccgtgtacctgctctattggactgcctttgcc
agcggcaacgggcagatgaacttccgggacgatccctatggctgggatgcggcactcgcc
gcgaagatcgaggcgcgctcggcgcgcgccgttctggccagccgctga
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