Sphingomonas sp. NIC1: A7E77_04980
Help
Entry
A7E77_04980 CDS
T04479
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snj03032
]
A7E77_04980
03400 DNA repair and recombination proteins [BR:
snj03400
]
A7E77_04980
Enzymes [BR:
snj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A7E77_04980
DNA replication proteins [BR:
snj03032
]
Prokaryotic type
DNA Topoisomerases
A7E77_04980
DNA repair and recombination proteins [BR:
snj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A7E77_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
ANC86290
LinkDB
All DBs
Position
1033603..1036098
Genome browser
AA seq
831 aa
AA seq
DB search
MAKPQNANEYGASSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEALAGH
CDRIDIQLNADGSVSVTDNGRGIPTGIHPEEGVSAAEVIMTQLHAGGKFENTSDDNAYKV
SGGLHGVGVSVVNALSEYLDLTIWRDGEEHYMRFAHGDAVAPLKVVGPSEGKKGTRVTFL
PSPATFKITEFDFDKLEHRYRELAFLNSGVRLFLTDARHDEPKTVELYYEGGIAAFVKWL
DRAKTPLFPEPIAINGQRDAIGMDVALEWNDSYYENVLAFTNNIPQRDGGTHIAAFRAAL
TRTLNNYAEKSGLLKKEKVTLTGDDMREGLTAIVSVKLPDPKFSSQTKDKLVSSEVRQPL
ESLMADKLAEWLEENPAHGRSIVGKIIDAAAAREAAKRARELTRRKGVMDIASLPGKLAD
CQEKDPAKSELFLVEGDSAGGSAKQGRDRHFQAILPLRGKILNTERARFDRMISSKEIGT
LIQAMGTGIGRDDFNADKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPELIERGHLFI
AQPPLYKATRGRSEVYLKDDAALDDYLVEAGASSMVFEAPGGPRSGADLKHLVDHARRMR
TLMRYVPRRYDAGIIEVLALAGALDPTFTRDQRAATVAEVTRRLDAGDEEAKWTARLTED
GGIHFERLWRGVTDHHIVEATFIASAEARKLHGLAAEQAESFAHAGKLIPAKGAAAVEAD
PVADGDGQIGSVNTTVGRGESLVARPSQLLEAILAAGRKGLAIQRYKGLGEMNAEQLWET
TLDPSNRTMLRVTSDDVSAADMIFTQLMGEVVEPRREFIQDNALNVANLDV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccccagaatgcgaacgaatacggcgcctcgtcgatcaaggtgctgaagggc
ctcgacgcggtgcgcaagcggccgggcatgtatatcggcgataccgacgacggatcgggc
ctgcaccatatggtgttcgaggtcagcgacaatgcgatcgacgaagcgctcgccggccat
tgcgaccggatcgatatccagctgaacgccgacggatcggtcagcgtgaccgataacggc
cgcggcatcccgaccggcatccatcccgaagagggcgtatcggcggccgaggtcatcatg
acccagctccacgccggtggtaagttcgaaaacaccagcgacgacaacgcgtataaggtg
tcgggcggcctgcacggcgtcggcgtctcggtcgtcaacgcattgtccgaatatctcgac
ctcaccatctggcgcgatggcgaggagcattacatgcgattcgcgcacggcgacgcggtc
gcaccgctcaaggtcgtcggcccgtcggaggggaagaagggcacgcgggtcaccttcctg
ccctcgcccgccacgttcaagatcaccgaattcgacttcgacaagctcgagcaccgctat
cgcgagctcgccttcctcaattcgggcgtgcgcctgttcctcaccgacgcgcggcatgac
gagccaaagacggtggaactctattacgaaggcggcatcgccgcattcgtgaagtggctc
gaccgcgccaagacgccgctcttccccgaaccaatcgcgatcaacggccagcgcgacgcg
atcggcatggacgtggcgctggagtggaacgacagctattacgagaacgtcctcgccttc
accaacaacatcccccagcgcgacggcggcacgcatatcgccgccttccgcgcggcgctg
acccgcacgctcaacaattacgccgaaaagtcgggccttctcaaaaaggagaaggtgacg
ctgaccggcgacgacatgcgtgaaggcctgaccgcgatcgtctcggtcaagctgcccgac
cccaagttcagcagccagaccaaggacaaattggtcagctccgaagtgcgccagccgctc
gaatcgctgatggcggacaagcttgcggaatggctcgaggagaatccggcgcacggtcga
tcgatcgtcggcaagatcatcgacgccgccgccgcacgtgaggcggcgaagcgcgcgcgt
gaactcacccgccgcaagggcgtgatggatatcgccagcctgcccggcaagctcgccgac
tgccaggagaaggaccccgcgaagtccgaactgttcctcgtcgagggcgattcggcaggt
ggatcggcgaagcagggccgcgatcgccatttccaggcgatccttcccctgcgcggcaag
attctcaacaccgaacgggcgcgtttcgaccggatgatctcgtcgaaggaaatcggtacg
ctgattcaggcgatgggcaccggcatcggccgcgacgacttcaacgccgacaagctgcgc
taccacaagatcgtcatcatgaccgacgcagacgtcgacggcgcgcatatccgcacgctg
ctgctgaccttcttctaccggcagatgcccgagttgatcgagcgcgggcacctcttcatc
gcgcagccgccgctgtacaaggcgacgcgcggccggtcggaagtgtatctgaaagacgat
gccgcgctcgacgattatctggtcgaggcgggcgcatcctccatggtgttcgaagcgccg
ggcggaccgcgttcgggcgccgacctcaagcatctggtcgaccatgcccgccgtatgcgc
acgctgatgcgctacgtgccgcgccgctacgacgccgggatcatcgaggtgctggcgctg
gccggtgcgctcgacccgaccttcacccgtgaccagcgcgccgcgactgtcgccgaggtg
acgcgccggctcgacgcgggcgacgaggaagccaagtggaccgcgcgcctgaccgaggac
ggcggcatccacttcgaacggctgtggcgcggcgttaccgaccaccacattgtcgaggcg
acgttcatcgccagcgccgaggcgcgcaagcttcacgggctggccgcggaacaggcggag
agcttcgcccatgccggcaagctgatcccggccaagggtgccgccgccgtggaggcggac
cccgtcgcggacggagacggccagatcggcagcgtcaacaccaccgtcggccgcggcgaa
agcctggtcgcgcgcccgtcgcagctgctcgaggcgatcctggccgcaggccgcaagggc
cttgcgatccagcgctacaaggggctgggcgaaatgaacgcggaacagctgtgggaaacc
acgctcgatccgtcaaaccgcaccatgctgcgcgtcaccagcgacgacgtctcggccgcc
gacatgatcttcacccagctgatgggcgaagtcgtggagccgcgccgcgaattcattcag
gacaatgcgctgaacgtcgcgaatctggacgtgtaa
DBGET
integrated database retrieval system
