Sphingomonas sp. NIC1: A7E77_06005
Help
Entry
A7E77_06005 CDS
T04479
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
A7E77_06005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snj03019
]
A7E77_06005
03009 Ribosome biogenesis [BR:
snj03009
]
A7E77_06005
04131 Membrane trafficking [BR:
snj04131
]
A7E77_06005
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snj04147
]
A7E77_06005
Messenger RNA biogenesis [BR:
snj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
A7E77_06005
Ribosome biogenesis [BR:
snj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
A7E77_06005
Membrane trafficking [BR:
snj04131
]
SNARE
SNARE associated proteins
Others
A7E77_06005
Autophagy
Aggrephagy
Other aggrephagy associated proteins
A7E77_06005
Exosome [BR:
snj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A7E77_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
CDC48_2
AAA_5
AAA_2
AAA_33
AAA_14
TIP49
IstB_IS21
RNA_helicase
NPHP3_N
AAA_28
Mg_chelatase
nSTAND3
AAA_24
AAA_18
ATPase_2
Vps4_C
AAA_7
ABC_tran
DUF815
AAA_17
Zeta_toxin
Parvo_NS1
AAA_30
AAA_25
TsaE
AAA_3
bpMoxR
PhoH
SLFN-g3_helicase
ATPase
Motif
Other DBs
NCBI-ProteinID:
ANC86474
LinkDB
All DBs
Position
complement(1238692..1240983)
Genome browser
AA seq
763 aa
AA seq
DB search
MADSDTPTRKIQVANSRPEDSGRGLAHLPRSLMAALGVGEGDVIEIVGKQSTPARAVGPY
PEDEGIEILRIDGLQRANAGVGAGDFVEVRKVESKPATRVVFAPAQANLRLQGQPQALKR
TFFGRPLCQGDVVATAGHQRVGNMPPGIQQFMNAPAYALQEIRLSVVSASPKGIVHIDEN
TEVELRPEYEEPTQRRADVTYDDIGGMAQTIDQLREMVELPLRYPELFQRLGVDPPKGLL
LYGPPGTGKTRLARAVANESDASFFLINGPEIMGSAYGESEGRLREIFEEAAKSAPSIVF
IDEIDSIAPKRGSVQGEAEKRVVAQLLTLMDGLEARANLVVIAATNRPEAIDEALRRPGR
FDREIVVGVPDERGRREILGIHTRGMPLGDKVDLVELARTTYGFVGADLAALTREAAIEA
VRRIMPKLNLEERTIPAEVLDELSVTREDFLEALKRVQPSAMREVMVEAPRVRWDDVGGL
DAAQNRLKEGVELPLKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAEANFIAT
KSSDLLSKWYGESEQQITRLFQRARQVAPCVIFIDELDSLVPARGGGLGEPQVTERVVNT
ILAEMDGLEELQSVVVIGATNRPNLIDPALLRPGRFDELVYVGVPNQEGRRRILGIQTQK
MPLADDVDLDAIARQTDRFTGADLEDVVRRAGLVALRRSLQSTAVTMADFESALTESRAS
VTPEMEKDYEKIAAQLKQDAAAIQPIGFISPGQLRGRGPKGAD
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagcgataccccgacgcgtaagatccaggtggcgaacagccgtccggaggat
tccggccgcggcctcgcgcacctgccgcgcagccttatggccgcgctgggcgtgggcgag
ggcgacgtgatcgagatcgtcggcaaacagtcgacgcccgcgcgcgcggtcgggccgtac
cccgaggacgaggggatcgagatcctgcgtatcgatggcctgcagcgcgccaatgccggc
gtcggcgcgggcgatttcgtcgaggtgcggaaagtggaatcgaagcccgcgacgcgcgtc
gtcttcgcgcctgcgcaggccaatctgcgcttgcagggccagccgcaggcgctgaagcgc
accttcttcgggcggccgctctgccaaggcgacgtcgtcgcgaccgcggggcaccagcgc
gtcggcaacatgccgccgggcatccagcagttcatgaacgcgccggcctatgcgttgcag
gaaatccgcctgtcggtcgtgtcggccagccccaagggcatcgtccatatcgacgagaat
accgaggtggagctgcgccccgaatatgaggagccgacgcagcgccgcgccgacgtgacc
tatgacgatatcggcggcatggcgcagacgatcgaccagctgcgcgagatggtcgaactg
ccgctgcgctaccccgagctgttccagcggctgggcgtcgatccgcccaagggcctgctg
ctctatggcccgccgggcaccggcaagacgcgcctcgcgcgcgccgtggcgaacgagagc
gacgcgtcgttcttcctgatcaacggccctgagatcatgggctcggcctatggcgagtcc
gaagggcggctgcgcgagattttcgaggaagcggcaaagagcgcaccgtcgatcgtcttc
atcgacgagatcgattcgatcgcccccaagcgcggcagcgtgcagggcgaggcggagaag
cgtgtcgtcgcgcagctgctgacgctgatggacgggctggaggcgcgcgcgaacctcgtc
gtgatcgccgcgaccaaccgacccgaggcgatcgacgaagcgctgcgtcgaccgggccgc
ttcgatcgcgagatcgtcgtcggcgtgcccgacgagcgcggccgtcgcgaaatcctgggc
atccacacccgcggcatgccgctgggcgacaaggtcgacctcgtcgaactggcgcgcacc
acctatggctttgtcggtgccgatttggccgcgctgacccgcgaggcggcgatcgaggcg
gtgcggcggatcatgcccaagctcaacttggaagagcggacgatcccggccgaggtgctc
gacgagctgtcggtgacgcgcgaggacttcctcgaggcgctgaagcgcgtccagccgagc
gcgatgcgcgaggtgatggtcgaggcgccgcgcgtgcgctgggacgatgtcggcgggctg
gatgccgcgcagaaccggttgaaggaaggcgtcgagctgccgctgaaggaccccgatgcc
ttccgccggttgggcattcggccggccaagggcttcctgctctatggcccgccgggcacc
ggcaagacgttgctcgccaaggcggtggcgcgcgaggcggaggcaaatttcatcgctacc
aaatcgagcgacttgctgtcgaaatggtatggcgagagcgagcagcagatcacgcgcctg
ttccagcgcgcgcggcaggtggcgccgtgcgtgatcttcatcgacgaactcgacagcctg
gtgcccgcgcgcggcggcggtctcggcgagccgcaggtgaccgagcgcgtggtcaacacg
atcctcgccgagatggacgggctggaggaattgcagtcggtcgtcgtcatcggcgcgacc
aaccggccgaacctgatcgaccccgcgctgttacggccgggccggttcgacgagctggtc
tatgtcggcgtccccaaccaggaggggcgccggcgtatcctgggcatccagacgcagaaa
atgccgctggccgacgatgtcgatttggacgcgatcgcgcgccagaccgaccggtttacc
ggtgccgatctggaggacgtggtgcgccgcgccggcctggtcgcgctgcggcggtcgttg
cagtcgaccgcggtgacgatggcggacttcgaatcggcgctgaccgaatcgcgggcgagc
gtgacgcccgagatggagaaggattacgaaaagatcgcggcgcagctgaagcaggatgcg
gcggcgatccagccgatcggcttcatctctcccgggcaattgcgcggacgcgggccgaag
ggcgcggactga
DBGET
integrated database retrieval system
