Sphingomonas sp. NIC1: A7E77_07645
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Entry
A7E77_07645 CDS
T04479
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
snj
Sphingomonas sp. NIC1
Pathway
snj03030
DNA replication
snj03430
Mismatch repair
snj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7E77_07645
03430 Mismatch repair
A7E77_07645
03440 Homologous recombination
A7E77_07645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snj03032
]
A7E77_07645
03400 DNA repair and recombination proteins [BR:
snj03400
]
A7E77_07645
Enzymes [BR:
snj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A7E77_07645
DNA replication proteins [BR:
snj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A7E77_07645
DNA repair and recombination proteins [BR:
snj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A7E77_07645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ANC86778
LinkDB
All DBs
Position
1580000..1580695
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AA seq
231 aa
AA seq
DB search
MREIVFDTETTGFKFSEGDRLVEIGCVEMVNRVETGRTFHAYYHPERDMPADAERVHGLS
AAFLSKFPVFAEGVAELLDFLGDAPLVAHNASFDFGFLNGELGALGFPPICHKTRMVDTL
QIARSRHPGAKHTLDALCTRYGVDRSHRVHHGALLDAQLLAQVYVELMGGRQIGLGLVSE
IATADTLAPVARRPVTVRPPRTFRPSEAELAAHAAFVSKLQDPIWGVAAFD
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgtcttcgataccgagaccaccggcttcaaattcagcgaaggcgatcgg
ttggtcgagatcggctgtgtcgagatggtcaaccgggtcgaaaccggccgcactttccac
gcctattaccaccccgaacgcgacatgccggccgatgccgagcgcgttcacggcctgtct
gcggcattcctctcgaaatttccggtgttcgccgagggcgtggcggagctgctcgacttt
ctgggcgatgcgccgctcgtcgcccacaacgcctcgttcgactttggcttcctgaacggc
gagctgggtgcgctcggcttcccgccgatctgccacaagacgcggatggtcgacacgctg
cagatcgcgcgcagccgccatcccggcgccaaacatacgctcgatgcgctttgtacccgc
tatggcgtcgatcggtcgcaccgtgtccaccatggcgcgctgctcgacgcgcagctactg
gcacaggtctatgtcgagctgatgggcggacggcagatcggcctggggctggtcagcgag
atcgcgaccgcggacacgctggcgccggtcgcgcgccgcccggtcacggtacgcccgccg
cgcacctttcgcccgtccgaggcggaacttgccgcccatgcggcatttgtttccaagttg
caggatccaatctggggggtcgcggcgttcgattaa
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