Sphingomonas sp. NIC1: A7E77_08540
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Entry
A7E77_08540 CDS
T04479
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
snj
Sphingomonas sp. NIC1
Pathway
snj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A7E77_08540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snj03400
]
A7E77_08540
DNA repair and recombination proteins [BR:
snj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A7E77_08540
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ANC86934
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Position
complement(1774271..1775029)
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AA seq
252 aa
AA seq
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MRPQPQIVRVIDLETTGSAPPAHGVCEIGWQDVALGADGRWELQGEGGSILVNPGRAIPP
ITQAIHHILDEDVADAPWWHDVARRVLDPYPRRVALAAHRADFEQQFCTPSLTHGQEWIC
TWKCALRLWPDSPSFSNQVLRYYRRPEGLDQQRGLPVHRAFPDAYVTAHHLRDQLNEAGL
AQCLDWSRTPGLIPRVRYGPYRGKAWSELDHESLMAFLTDRDPDIRFTANAEMDRRSGGG
AVGRASAQDLLL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccccagccccagatcgtccgcgtcatcgacctcgaaaccaccggcagcgcgccg
cctgcgcatggcgtgtgcgaaatcggctggcaggacgtcgcactcggcgccgatggccgc
tgggagctgcagggcgagggagggtcgattttagtcaatcccggccgcgccatcccgccg
atcacgcaggcgattcaccacatcctcgacgaggatgtcgccgatgcgccctggtggcac
gacgtcgcacgccgcgtgctcgacccctatccgcgccgcgtcgcgctcgccgcgcatcgg
gcggacttcgaacagcaattctgcacgcccagcctgacccatgggcaggagtggatctgc
acctggaaatgcgcgctgcgcctgtggccggacagtcccagtttttctaatcaggtgctg
cgctattatcgccgccccgaggggctcgatcagcagcgcggcctgcccgttcatcgcgcc
ttccccgacgcctatgtcaccgcgcaccacctgcgcgaccagttgaacgaggcgggcctc
gcgcaatgcctcgactggtcgcgcacgccggggttgatcccgcgcgtccgctacggcccc
tatcgcggcaaggcgtggagcgagctcgaccacgaaagcctgatggccttcctgaccgat
cgcgatcccgacatccgcttcaccgccaatgccgaaatggatcgccgcagcggtggcggc
gccgtgggacgcgccagcgcgcaggacctcttgctatag
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