Sphingomonas sp. NIC1: A7E77_09090
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Entry
A7E77_09090 CDS
T04479
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snj02000
]
A7E77_09090
Transporters [BR:
snj02000
]
Other transporters
Pores ion channels [TC:
1
]
A7E77_09090
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
MtrB_PioB
Motif
Other DBs
NCBI-ProteinID:
ANC87035
LinkDB
All DBs
Position
1891581..1893506
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AA seq
641 aa
AA seq
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MTVRLSVSVVRPSLLTLGLLLAAPAAAQIAPTADPANSDDIVVTATRVAQPAAEVGQAVT
VITRDEIDRRQTVSVADLLSTTPGVTVTRNGSLGGFTGVRLRGAEAEQTLVVIDGVRVND
PSSPGGGFDFANLLSASVQRIEVLRGPNSVPWGSQAIGGVVNVITEEPTERLKARASAEY
GYADSLYAQGGISGRSGAISGALTGGYLRSDGISAAANGTERDGYRQYGATGRLGVDFTD
GIGLDLRGYWADSKTQTDGYPAPNYILADDPSFSTANELYGYAGLHANFGTFRNRVAFTI
ADINRDTYAKPGATPSPFRGRSERYEYQGDYQPIDQVRIVAGVEHEDSRYRDSSLRRSVG
ITSVYGEAIVKPFDALTLTGGVRNDDHETFGNHTTFGADAALALRTGTTLRASYGEGFKA
PTLYQLYSPYGNTRLDPETARNWDAGIEQALLDGRARVSATYFNRDTRNQISFRGCSGAE
QTTTGSICVNRPFGVYDNIQRTHAEGVEFAIGLRPVDALTVSANVSYIDAENRTPGTAFR
TDLLRRPKETAAFVVDYRLPFGLGIGGTVQIVGDSFDSDSYGSRVRVDGYALASVRAELP
IGDRLSIYGRIDNVTDARYQTVAEYGTYGRAAYGGVRVKLD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcgcctatctgtgtccgttgtccgtccgtcgctgttgacgctaggcctgctg
ctcgccgcgcccgccgccgcgcaaatcgcgccgaccgccgatcctgccaacagcgacgac
atcgtcgtcaccgcgacccgcgtcgcccagcctgcggccgaagtcggccaggccgtgacc
gtcatcacccgcgacgagattgatcgccgccagaccgtgtcggtcgccgatctgctgtcg
accacccccggtgtcaccgtgacgcgcaacggcagcctgggcggcttcactggcgtgcgc
ctgcgcggcgccgaggcggaacagacgttggtcgtgatcgacggcgtgcgcgtcaacgat
ccctcgtcgcccggcggcggcttcgatttcgccaatctgctgtcggccagcgtccagcgc
atcgaagtgctgcgcggccccaattcggtcccctggggcagccaggcgatcggcggcgtc
gtcaacgtcatcaccgaagaaccgaccgagcggctgaaggcgcgtgccagcgccgaatat
ggctatgccgacagcctttacgcgcaaggcggcatctcgggtcgcagcggcgcgatctcc
ggcgcgctgaccggcggctatctgcgcagcgacggcatctcggccgcggccaacggcacc
gagcgtgacggctatcgccaatatggcgcgaccggccgcctgggcgtcgacttcaccgac
ggcatcggcctcgacctgcgcggctattgggccgacagcaagacgcagaccgacggctat
cctgcgccgaactacatcctcgccgacgaccccagcttctcgaccgcgaacgaactgtac
ggctatgccggcctgcacgccaattttggcacgttccgcaaccgcgtcgccttcaccatc
gccgacatcaatcgcgacacctatgccaagcccggcgccacgccgtcgccgttccgcggc
cgctcggaacgctacgaatatcagggcgattaccagccgatcgatcaggtccgcatcgtc
gccggcgtcgaacatgaagacagccgctaccgcgattcgagcctgcgccgctcagtcggc
atcaccagcgtctatggcgaagcgatcgtgaagccgttcgacgcgctgaccctgaccggc
ggcgtccgcaacgacgaccatgagacgttcggcaaccacaccaccttcggcgccgacgct
gcgctggcgctgcgcaccggtacgacgctgcgggcgagctatggcgaaggtttcaaggcg
ccgaccctttaccagctctacagcccgtacgggaacacgcgcctcgatccggaaaccgcg
cgcaactgggatgccggcatcgaacaggcgctgctcgacggccgcgcccgcgtctcggcg
acctacttcaaccgcgacacgcgaaaccagatcagcttccgcggctgctcgggcgccgag
cagaccaccaccggctcgatctgcgtcaaccgcccgttcggcgtctatgacaacatccag
cgcacccatgccgagggcgtggagttcgcgatcggcctgcgtccggtcgatgcgctgacc
gtctcggccaatgtgtcgtacatcgatgccgaaaaccgcacgcccggcaccgccttccgc
accgatctgctgcgccggcccaaggaaaccgcggcgttcgtcgtcgactatcgcctgccg
ttcggcctgggtatcggtggcaccgtgcagatcgtcggcgacagcttcgacagtgacagc
tacggcagccgcgtgcgtgtcgacggctatgcgctggccagcgtccgcgccgaactgccg
atcggggatcgcctgtcgatctacggccgcatcgataacgtcaccgacgcgcgctaccag
acggtcgccgaatacggcacctacggccgcgcggcctatggcggcgtccgcgtgaagctg
gactga
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