Sphingomonas sp. NIC1: A7E77_09210
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Entry
A7E77_09210 CDS
T04479
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
snj
Sphingomonas sp. NIC1
Pathway
snj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A7E77_09210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snj03400
]
A7E77_09210
Enzymes [BR:
snj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7E77_09210
DNA repair and recombination proteins [BR:
snj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A7E77_09210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
Flavi_DEAD
AAA_30
Zn_ribbon_6
HCV_NS5a_1b
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ANC88387
LinkDB
All DBs
Position
complement(1921859..1924030)
Genome browser
AA seq
723 aa
AA seq
DB search
MSSRARVLVLNSALGPLDYRVPAGSHVEPGSVVIAPLGPRQLLGVVWEPERMPSDAEVGD
NRLRPLLGVVDVPPLAAPLRRLIEWTADYYLAPPAAVVRMALASTSALEGARTVTEYRAT
GTVPPRLTPQREQALERIGDRQGLIRELATLADVSDAVVRGLVKAGALEAVSVDIDSPYP
HPDPAFGPPTLAEAQQAAADELVAGVAAHDFRPTLLDGVTGSGKTEVYFEAVAEAIRQGR
QTLVLLPEIALTEPFLKRFHDRFGCEPVAWHSGLRSTQRRRAWRAIASGEALVTVGARSA
LFLPYRNLGLIVVDEAHETSFKQEEGVHYHARDVAVMRGKFEQCPVILASATPAIETRQQ
VALGRYAELKLPGRYGPAEMPTIEAIDLIQHPPERGTWIAPKLVTALRDTFEKGEQSLLF
LNRRGYAPLTLCRNCGHRFQCPNCTAWMVEHRLTRRLACHHCGHVMPTPRACPECKAEDS
LVACGPGVERIADEVATLFPEAKTAVVTSDTIWSPAKAAEFVGRMEAGDIDIVVGTQLVT
KGYHFPNLTLVGVIDADLGLEGGDLRAAERTFQQIRQVSGRAGRGAKPGHVFIQTHSPSA
QVMQALITGDAEAFYEAETEARRDAGAPPFGRYAAIVVSSEEQACAHEVARAVAQSAPRV
DGMAVYGPAPAPLAMLRGRHRYRLLVHARRALDVQDVIRDWLGGLDWPAKARVTVDVDPY
NFL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgcgcccgcgttctcgtccttaattccgcgctcggcccgctcgactatcgc
gtgccggcgggctcgcatgtcgagccggggtcggtggtcatcgcgccgctggggccgcgt
cagttgctcggcgtggtgtgggaacccgagcgcatgccgtcggatgcggaggtcggcgac
aaccgcctgcggccgctgctcggcgtggtcgatgtgccgccgctcgccgcgccgttgcgc
cggctgatcgagtggaccgccgactattacctcgcgccgccggccgcggtggtgcggatg
gcgctcgcctccacctcggcgctggagggggcgcggaccgtcaccgagtatcgcgccacc
ggcaccgtgccgccgcgcctcaccccacagcgcgaacaggcgctggagcggatcggcgac
cggcagggactgatccgcgagctcgcaaccctcgctgacgtgtccgacgcggtggtccgt
gggctggtgaaggccggcgctctggaagcggtgagcgtcgatatcgacagcccctatccg
caccccgaccccgcctttgggccgccgacgctcgccgaggcgcagcaggccgcggcggac
gaactggtcgccggggttgcggcgcatgacttccgccccaccctgctcgacggcgtcacc
ggatcgggcaagaccgaggtgtatttcgaggcggtggccgaggcgatccggcaggggcgg
cagaccctcgtgctgctgcccgagatcgcgctgaccgaaccgttcctgaagcgcttccac
gaccgcttcggctgcgagccggtggcgtggcattcgggcctgcgctccacccagcggcgg
cgggcgtggcgcgcgattgcgagcggcgaggcgctggtgacggtcggcgcgcggtccgct
ctgttcctgccctatcgcaacctcggcctgatcgtcgtcgacgaggcgcatgagacgagc
ttcaagcaggaagagggcgtccattaccatgcccgcgacgtcgcggtgatgcgcggcaag
ttcgagcaatgcccggtgatcctggccagcgcgaccccggcgatcgagacgcgccagcag
gtggcgctgggccgctatgccgaactgaagctgcccggccgctacggccccgccgaaatg
ccgacgatcgaggcgatcgatctgatccagcacccacccgaacgcgggacgtggatcgcg
ccgaagctggtgacggcgctgcgcgacacgttcgagaagggcgagcagtcgctgctgttc
ctcaaccggcggggctatgcgccgctgacgctgtgccgcaattgcgggcaccgctttcaa
tgccccaattgcaccgcctggatggtcgagcatcgcctcacccgccggctcgcctgccac
cattgcggccatgtgatgccgacgccccgcgcctgccccgagtgcaaggcggaggacagt
ctggtcgcctgcggtcccggcgtcgagcggatcgcggacgaggtggcgactttgttcccc
gaggcgaagaccgcggtcgtcacctcagatacgatctggtcgccggccaaggccgcggag
ttcgtcggccggatggaagcgggcgacatcgacatcgtcgtcggcacgcagctcgtcacc
aagggctatcactttcccaatctgacattggtcggcgtgatcgatgccgatctggggctg
gagggcggcgacctgcgggcggcggagcggacgttccagcagatccggcaggtgtcgggg
cgtgcggggcgtggagccaagccggggcatgtgttcatccagacgcacagtccgtcggcg
caggtgatgcaggcgctgatcaccggcgatgccgaggcattctacgaggcggagaccgag
gcgcgtcgcgatgcgggcgctccgccctttggccgctatgccgcgatcgtcgtgtcgtcg
gaggagcaggcgtgtgcgcatgaggtggcgcgggcggtggcgcagagcgcgccgcgggtg
gatggcatggcggtctatggccccgcccctgccccgctcgccatgctgcgcgggcggcac
cgctatcggttgctggtgcatgcccggcgcgcgctcgacgtacaggacgtgatccgcgac
tggctgggcgggctcgactggccggcgaaagcgcgcgtgacggtggacgtcgatccgtat
aacttcctgtaa
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