Sphingomonas sp. NIC1: A7E77_09865
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Entry
A7E77_09865 CDS
T04479
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
snj
Sphingomonas sp. NIC1
Pathway
snj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A7E77_09865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snj03400
]
A7E77_09865
DNA repair and recombination proteins [BR:
snj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A7E77_09865
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A7E77_09865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ANC87182
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Position
2063317..2064057
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AA seq
246 aa
AA seq
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MPAMHLRTPAIVLAVRAHGEHGAVVRALTRDNGVQPGYVRGGRSRQMRPILQPANAIQGE
WRARTGEQLPALTIEPLHSRAALHGEPLAAAALAWVTALTAAALPEAQPYPHLYDGLGAV
LDAVEAAPSARGWASVLVRYELLLLAELGFGLDLGRCVVTGGDVDLAYVSPRSGGAVSRG
AAYGYEEKLFALPAFLHAGGAAEWPDIFAGLAITGHFLSRDVLTDRHADPLAARARLVAM
LKRAVA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atcccggccatgcatctgcgcacgcctgccatcgttctcgccgttcgggcgcatggcgag
catggggcggtggtgcgggcgttgacgcgcgacaatggcgtgcagccgggctatgtccga
ggcggccggtcgcggcagatgcggccgatcctgcaaccggccaacgcgatccagggggaa
tggcgggcgcggacgggggagcaattgccggcgctgaccatcgagccgctgcacagccgc
gccgctttgcacggcgagccgctcgcggcggcggcgctcgcctgggtgacggcgctgacc
gcggcggctttgcctgaggcgcagccctatccgcacctgtacgatggtttgggcgcggtg
ctcgatgcggtggaggcggcgccgtccgcgcgtggctgggcgagcgtgctggtgcggtac
gagctgctgctgctggcggaactggggttcgggctggaccttggccggtgcgtggtgacg
ggcggcgatgtggatctggcctatgtctcgccgcgtagcgggggggcggtgtcgcgcggt
gcggcctatggctatgaggagaaattgttcgctttgccggcgtttctgcatgccggcggg
gcggcggagtggccggatatctttgccgggctggcaatcaccggccatttcctcagccgc
gacgtgctgaccgaccgacacgccgatccgctcgcggcacgcgcacggctggtcgccatg
ctgaaaagggccgttgcgtga
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