Sphingomonas sp. NIC1: A7E77_11080
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Entry
A7E77_11080 CDS
T04479
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snj02000
]
A7E77_11080
Transporters [BR:
snj02000
]
Other transporters
Pores ion channels [TC:
1
]
A7E77_11080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ANC87392
LinkDB
All DBs
Position
2317657..2321766
Genome browser
AA seq
1369 aa
AA seq
DB search
MRWLGLGIAALVAVFVAALALVDTGIGHRWVTERIATVRTANGLRFAIGRIDGSLYGRAR
LTDVRVYDLDGLLLQAPSVDLDWRPWAWVRHRLVIRRLAVGQAVLFHAPHTRANPQRGPI
LPDFDIAIDDLRVDRLVLAKPVLGTPRVGRVAGRADIRDGRALVRLGAVVAGTDRLAVRI
DAAPDRDRFDIDVRAAGAATGVLARSLGVRRAVRLDVDGKGSWTHWRGRAVGRIGTARAV
DLALAADAGRYTLGGEVATAGWTSPVVQRLTSPRVRIAGSATFADRRLDGTLSLRSTALA
MTTTGVIDLGTSAWRNVRIEARLLRPAAVIPTMSGSGVVLRAVLDGGFRTALFDYRLRAD
QLAIDRTGMRGVRLAGSGRLGGRVLTMRTRFVAAEVTGVGDVAGGILRNLSLDGPVRLTG
SLLTADALRLRSDKLDGRIMVSLDLATGRYEAGLNGTLGRLYIKGLGVVDVRSDLTVVPG
PGGKGTRIVGRGTAQVVRLDNGFLRTLTGGLPRVVASLERAPDGTIRFADLVLTSPLLTL
RGSGYRRNDETFHIDATGRHARYGPVTLLRLDGKIDRPTLDIVFAAPNATMGLSQVRLHL
DPTPTGFNVQAQGGSRLGPFAGTGRILLLPPGVDDVLFVDRLAVSGTIASGRLAMPPGGF
EGTLTVAGGGLSGALRFHPVGTVQQIVMSLDAANAQLSGATLRRGHLEATLLLDPAGASI
DATASGQGLRQGRLSLARFAGNAKLRGGTGEIRASIAGSRGRAFDVQTVIAVAPDRYTVS
AQGTLDRRPLKLLEPAIVTRDGDGWQLAPTKLAFAGGEGSLAGRFADNALAVDASLTRMP
LAILDIGFPRLGLGGTASGRIVYASRAGEAPTGRIDLTLRGLSRAGLVLASRPIDVGLAG
VLSADRLGVRAVMASGGRTIGRAQALLKPLGAGDLASRIAAAPLIAQLRYQGPADTLWRL
TGVELFDLSGPVAIGADVSGRIGAPVIRGVLQANGARIESAATGTVLTNVVASGKFGGSQ
LQIDRFAADAGKGGRVTGVGTFDFGAARGVGVEVRLQADRAVMINRDDFGATVTGPLTFL
SKGVGGQIAGNVLLDRSRYRLGQASAATAVPRLNIREINLPDGGEEDEAPPSPWTLAIKA
KAPDKMIVSGLGLSSEWSADLAIAGEPGNPAITGQATLVRGDYEFAGRKFELRRGIIRFG
GEVPANPALDIEANADSTGLSASIRVTGTALKPEISFTSVPALPQDELLSRLLFGTSITK
LSAPEALQLAAAVAALQDGGNGLNPINAVRRAAGLDRLRILPADPQTGQGTSIAAGKFVT
RRLYAEIVTDGQGYSATRLEYQVTRWLSLLSSISTLGRQSANVRVSKDY
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctggcttgggctgggcatcgccgcgctggtggcggtgttcgtcgccgcactggcg
ctggtcgataccggcatcggccatcgctgggtcacggagcggatcgcgacggtgcgcacc
gcgaacgggctgcgcttcgcgatcgggcggatcgacgggtcgctgtatggcagggcgcgg
ctgaccgatgtgcgcgtctacgatctcgacggactgttgctgcaggcgccatcggtcgat
ctggattggcggccctgggcatgggtgcggcatcggctggtgattcggcggctggcggtg
gggcaggcggtgctgttccacgcgccgcatacgcgggcaaacccgcagcgcggaccgatc
ctgcccgatttcgatattgcgatcgacgatctgcgtgtcgaccggttggtgctggcgaaa
ccggtgctcggcacaccgcgggtcgggcgggtcgcggggcgggcggatatccgcgacgga
cgcgccctcgtgcggctcggcgccgtggtcgcgggaaccgaccggctggcggtgcggatc
gatgcggcgccggatcgtgaccggttcgatatcgacgtgcgcgcggccggcgccgcgacc
ggcgtgctcgcgcgcagtctcggcgtacggcgggcggtgcggctggacgtcgacggcaag
ggcagctggacgcactggcgcgggcgtgcggtcgggcggatcggtacggcacgggcggtc
gaccttgcgctagccgcggatgccggccgctatacgctggggggcgaggtggcgacggcg
ggatggaccagcccggtcgtccagcggctgaccagcccgcgtgtgcgtatcgcgggctct
gcgaccttcgccgaccggcggctcgacggcacgctgtcgctgcgcagcacggcgctggcg
atgacgacgaccggggtgatcgatctgggcacatcggcctggcgcaatgtgcggatcgag
gcgcggctgctgcggcccgcggcggtgatcccgacgatgagcggcagcggcgtcgtgctg
cgcgcggtgctggatggcgggttccggaccgcgctgttcgactatcgcctgcgcgccgac
cagctggcgatcgaccggaccggcatgcgcggggtgcggctggcgggcagcggacggctg
ggcggccgtgtgctgacgatgcggacgcgcttcgtcgcggcggaggtgacgggcgtgggc
gacgtcgccggcggcatcctgcgcaacctcagcctcgacgggccggtgcggctgacggga
tcgttgctgaccgccgatgcgctgcggctgcgatcggacaagctcgacgggcggatcatg
gtgtcgctggatctggcgaccgggcgatacgaggcggggctgaacggcacgctcgggcgg
ctgtacatcaaggggctgggcgtcgtggacgtccgatccgacctcaccgtcgtgccgggg
ccgggcggcaagggcacgcggatcgtcgggcgtggcacggcacaggtcgtgcggctggat
aacggcttcctgcgcacgctgaccggcggtttgccgcgcgtcgtcgcgtcgctggaacgc
gcgcccgacggcacgatccgctttgccgatctggtgctgacgtcgccgctgctgacgttg
cggggcagcggttatcgccgcaacgacgagacgttccatatcgacgcgaccgggcggcac
gcgcgctacggcccggtgacgctgctgcggctggacgggaagatcgaccggccgacgctc
gatatcgtcttcgccgcgcccaatgcgacgatggggctgagtcaggtgcgattgcacctc
gacccgacgccgaccggcttcaacgttcaggcgcagggcggatcgcggctggggccgttc
gcggggacgggacgtatcctgctgctgccgccgggcgtcgacgacgtgctgttcgtcgac
cggctggcggtgagcggcacaattgcatcgggccggctcgcgatgccgccgggcgggttc
gagggcacgctgaccgtagcgggcggcggcctgtcgggcgcgttgcgcttccacccggtg
ggcacggtgcagcagatcgtgatgagcctggatgccgcgaatgcgcagctgtcgggtgcg
acgctgcggcgtgggcatctggaagcgacgctgctgctcgatccggcgggcgcttcgatc
gacgcgaccgcatcggggcagggactgcggcaggggcggctgagcctcgcgcgctttgcg
gggaatgcgaagctgcgcggcgggacgggcgagatccgcgcgtcgatcgccggatcgcgg
gggcgcgcgttcgacgtgcagaccgtgattgcggtggcgccggatcgctataccgtgtcg
gcgcagggcacgctcgaccgccggccgctgaaattgctcgaacctgcgatcgtcacgcgc
gatggcgacgggtggcagctggcgccgaccaagcttgccttcgcgggtggtgagggcagc
ctggcgggacggttcgccgacaacgcgctggcggtggatgccagcctgacgcgcatgccg
ctcgcgatcctcgacattggcttcccgcggctgggactgggcggcaccgcgtcggggcgg
atcgtctatgccagccgggcgggcgaggcaccgaccgggcggatcgacctgacgctgcgc
gggctgagccgcgcgggcctcgtcctcgcgtcgcggccgatcgacgtggggctggcgggc
gtgctctccgccgaccggctgggcgtgcgcgcggtgatggcgtcgggcgggcgcacgatc
gggcgggcgcaggcgctgctcaagccgctgggggcgggcgatctcgccagccgtatcgcc
gcggcgccgctgatcgcgcagctgcgctatcaggggccggcggataccttgtggcggctg
acgggtgtcgagctgttcgacctgtccggtcccgtcgcgatcggcgcggacgtcagcggg
cggatcggcgcgccggtgatccggggcgttttgcaggccaatggcgcgcggatcgaaagc
gctgcgaccggcaccgtgctgaccaacgtcgtcgccagcggcaagttcggcggatcgcaa
ttgcagatcgatcgcttcgcggccgatgcgggcaagggcgggcgcgtgacgggtgtcggc
acgttcgatttcggcgcggcgcgcggcgtgggggtcgaagtgcgcttgcaggcggatcgc
gcggtgatgatcaaccgcgacgatttcggcgcgaccgtcacggggccgctgaccttcttg
tccaagggcgtgggtgggcagatcgcgggtaacgtcctgctcgaccgcagccgctatcgc
ctgggccaggcgagtgccgccaccgccgtgccgcggctcaacatccgcgagatcaacctg
cccgacggcggcgaagaggacgaggcgccgccatcgccctggacgctggcgatcaaggcg
aaggcgcccgacaagatgatcgtcagcggcctgggcctgtcgagcgaatggtccgccgac
ctggcgatcgcgggcgagccgggcaatccggcgatcaccggccaggcgacgctggtccgc
ggcgactatgaattcgccggccgcaagttcgagctgcgtcgcggcatcatccgcttcggc
ggcgaggtgccggccaatcccgcgctggatatcgaggcgaatgccgacagcacgggcctg
agcgcttcgatccgcgtcaccggcaccgcgctgaagcccgagatcagcttcaccagcgtg
ccggcgctgccgcaggacgaattgctgtcccgcctgctgttcggcacgtcgatcaccaag
ctgtccgcgcccgaggcgttgcagctcgccgcggcggtggcggcgttgcaggacggcggc
aacgggctcaacccgatcaacgcggtacggcgcgcggcggggctcgaccggttgcgcatc
ctgcccgccgatccgcagaccgggcagggcacgtcgatcgcggcgggcaagttcgtgacg
cggcgactgtacgcggaaatcgtcaccgacgggcagggctattcggcgacgcggctggaa
tatcaggtcacgcgctggctctcgctgctgtccagcatctccaccctgggccggcaaagc
gcaaacgtgcgcgtgtcgaaggattattaa
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