Sphingomonas sp. NIC1: A7E77_11635
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Entry
A7E77_11635 CDS
T04479
Name
(GenBank) hypothetical protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
A7E77_11635
Enzymes [BR:
snj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
A7E77_11635
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
PQQ
BppU-like_C
Motif
Other DBs
NCBI-ProteinID:
ANC87492
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All DBs
Position
2440199..2442139
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AA seq
646 aa
AA seq
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MGRQALRSGIAGWVLLATGVAASVQAGAEGPARQAERLDRGVVAVPAEGGGVLIDWRSLS
SDPKGVGFDVYRDGRKVTSAPVTQSTNFRDPDGTPASRYAVRMIAPGTAGAMTPAVPVWA
KGYWSIPLDPPAGGTTPDGEAYSYTANDVGMGDLDGDGQPDLVLKWDPTNSHDNSQGGYT
GPVYLDGYTLGGKRLWRIDLGRNIRAGAHYTQFLVQDFDGDSRAEVAMKTADGTVDGLGT
VIGDAKADWRQHDGEVPQADKTGAHVTADGRMVAKLAGRILTGPEYLTVFDGRTGKALAT
APYDPPRGPRNDPGFAEMAKLWGDAYGNRVDRFLAGVAYLDGRHPSMIFARGYYARTAIA
AWDYRNGKLTERWLFDTNQPGNADYADRGNHQLSIADVNGDGRDEVIYGSMAVSADGKGL
WTQPLYHGDTMHVGDLDPSRPGLEKFGVHEQILHNGGIGSALLDARTGEILWTKPAKTDT
GRGLSADIDPRYVGEEMWGANQPDLYDVHGKAIGPHPRQTNFAIWWDGDLLRELLDGTTI
SKWNWKTGKAEPLLVAEGAASNNGTKATPALQADLIGDWREEVVWRSADNRELRIYTTPW
PTTHRITTLLQDPIYRAGIAWQNTAYNQPPHTGFYLGMTKASDTPE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgggacggcaggcattacggagcggaatcgcgggctgggtcttgctggcaacgggcgtg
gcggcgtccgtgcaggcgggggcggaagggccggcgcggcaggccgaacggctggaccgc
ggtgtcgtcgcggtgccggcggagggcggcggcgtgctgatcgattggcgctcgctgtcg
tccgatcccaaaggcgtcgggttcgacgtctatcgcgacggacgtaaggtgacctctgca
cccgtcacgcaatcgaccaacttccgcgatcccgacggcacgccggccagccgctatgcg
gtgcggatgatcgcgccgggcacggcaggcgcgatgacgccggcggtgccggtctgggcg
aagggctattggtcgatcccgctcgatccccctgcgggcggcacgacgccggatggcgag
gcgtatagctatacggcgaacgacgtcggtatgggcgatttggacggcgacggtcagccc
gatctggtgctgaaatgggacccgaccaacagccatgacaacagccagggtggctatacc
gggccggtctatctcgacggctatacgctgggcggcaagcggctgtggcggatcgacctg
gggcgcaacatccgcgccggtgcgcattacacgcaattcctggtgcaggatttcgacggc
gatagccgcgccgaagtggcgatgaagaccgccgacggcacggtcgatggcctgggcacc
gttatcggcgacgcgaaggccgactggcgccagcatgacggcgaggtgccgcaggcggac
aagaccggcgcgcatgtcaccgccgacgggcggatggtcgcgaagctcgccgggcgtatc
ctgaccggcccggaatatctgaccgtgttcgacgggcgcacgggcaaggcgctggccacc
gcgccctacgatccgccgcgcggcccccgcaacgatccgggctttgccgagatggcgaag
ctgtggggcgatgcgtacggcaaccgcgtcgaccggtttctggcgggcgtcgcctatctc
gacgggcggcacccgagcatgatcttcgcccgcggctattatgcgcgcaccgcgatcgcc
gcgtgggactatcgcaacggcaagctgaccgaacgctggctgttcgacacgaaccagccg
ggcaacgcggattacgccgatcgcggcaatcaccagttgagcatcgccgacgtcaatggc
gacgggcgtgacgaggtgatctacggatcaatggcggtcagcgccgatggcaaggggctg
tggacgcagccgctctaccatggcgacacgatgcacgtcggcgacctcgatccatcgcga
ccggggctggagaagttcggggttcatgaacagattttgcacaatggcgggatcggatcg
gcactgctcgatgcgcggaccggcgagatactgtggaccaagcccgccaagaccgacacc
ggccgcggactcagcgccgatatcgacccgcggtatgtcggcgaggaaatgtggggggca
aaccagcctgacctctatgacgtgcacggcaaggcgatcgggccgcatcccaggcagacc
aacttcgcgatctggtgggacggcgatctgctgcgcgaactgctggacggcacgaccatc
agcaagtggaactggaagacgggcaaggccgaaccgctactggtggcggaaggcgcggcg
tccaacaacggcaccaaggcgacgcctgccctccaggccgacctaattggcgactggcgc
gaggaggtggtgtggcgcagcgccgacaatcgcgagctgcgcatctatacgacgccgtgg
ccgacgacgcaccggatcaccacgctgttgcaggacccgatctatcgcgccggcatagcg
tggcagaacacggcgtataatcagccgccgcacacgggcttctaccttggcatgaccaag
gcatccgatacaccggaatga
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