Sphingomonas sp. NIC1: A7E77_12245
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Entry
A7E77_12245 CDS
T04479
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
snj
Sphingomonas sp. NIC1
Pathway
snj00300
Lysine biosynthesis
snj00470
D-Amino acid metabolism
snj01100
Metabolic pathways
snj01110
Biosynthesis of secondary metabolites
snj01120
Microbial metabolism in diverse environments
snj01230
Biosynthesis of amino acids
Module
snj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A7E77_12245
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A7E77_12245
Enzymes [BR:
snj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
A7E77_12245
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ANC87598
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Position
2594202..2595416
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AA seq
404 aa
AA seq
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MKPMGALPPEFAGQRGMLTIAGRPADDWAEATPVFVYDVGIVAARVARFRAAFPDVDLHY
AIKANPLPALLDRVAPLVDGLDVASGGELEKALAVKPASAISFAGPGKRDVELRAAIRAG
ATLNVESEGEATRALRLGEELGIAPRLAVRVNPDVELRGSGMRMGGRPSPFGVDAVRAAA
LVRAIVASGADWRGFHIYAGSQALDAGAIAETQAATLALAARLADEAGAAPQLVNLGGGF
GVPYFSGDVPLDVEAVGAALGEALPARPAVLGQTSFAIELGRWLVAEAGVYLTRIVDRKD
SQGETFLVTDGGLNHQLAASGNFGTVVRRNYPLALAREVGGVGDETVSVVGPLCTPLDRL
GDRIALPHADAGDLIAIFMAGAYGASASPSGFLGHPPAVEIVAG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatgggggcgctgccgcccgaatttgccgggcagcgcggcatgctgacgatc
gcggggcggcctgcggacgactgggcggaggcgacgcccgtcttcgtctatgacgtcggc
atcgtcgcggcgcgcgtggcgcggttccgggcggccttccccgacgtggatctgcattat
gcgatcaaagccaaccccttgcctgcgctgctcgatcgggtcgcgccgctggtcgacggg
ctggacgtcgcgtcggggggtgagctggagaaggccttggcggtgaagcccgcgtcggcg
atcagcttcgccgggccgggcaagcgcgatgtcgagttgcgcgcggcgatcagggcgggc
gcgacgctcaacgtcgaatcggaaggcgaggcgacgcgggcgttgcggctgggtgaggag
cttggcatcgctccgcggctggcggtgcgggtcaatcccgacgtcgaattgcgcggttcg
ggcatgcggatgggcgggcgaccgtcgcccttcggcgtcgacgcggtgcgcgcggcggcg
ctggtccgcgcgatcgtcgcgagcggggcggactggcggggctttcacatttatgccggc
agtcaggcgctggatgccggcgcgatcgccgagacgcaggccgcgacgctggcgctcgct
gcgcgactcgccgacgaggcgggcgctgcgccgcagctggtcaatctgggcggcgggttc
ggcgtgccctatttctctggcgacgtgccgctggatgtcgaggcggtgggcgcggcgctt
ggcgaggcactgccggcgcggcccgccgttctcggccagaccagctttgcgatcgagctg
gggcgctggctcgtggcggaggcgggcgtctatctgacgcggatcgtcgatcgcaaggac
agtcagggcgagacgttcctcgtcaccgatggcggcctcaatcaccagctcgccgcgtcg
ggcaatttcggcacggtggtacggcgcaactatccgcttgcgctggcgcgcgaagtgggc
ggcgtgggcgacgagacggtgtcggtggtggggccgctgtgtacgccactcgaccggctg
ggcgaccgcatcgcgctgccgcatgccgacgcgggtgacctgatcgcgatcttcatggcg
ggggcctatggtgccagcgccagtccgtccggctttctggggcatccgcccgcggtggag
atcgtcgcgggttag
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