Sphingomonas sp. NIC1: A7E77_12350
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Entry
A7E77_12350 CDS
T04479
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snj03021
]
A7E77_12350
Transcription machinery [BR:
snj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A7E77_12350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ANC87618
LinkDB
All DBs
Position
complement(2617693..2618595)
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AA seq
300 aa
AA seq
DB search
MAARSNVPATIPALGGEQSLNRYLAEIKKFPILQPEQEYMLAKRFQEHGDTEAAAQLVTS
HLRLVAKIAMGYRGYGLPTSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIRASIQEY
ILRSWSLVKMGTTAAQKKLFFNLRRMKSKLDAFEDGDLRPEHITKIATDLGVAESDVVSM
NRRMAMGGDTSLNVSMREDGEGQWQDWLQDDAPLQDAVVADAQEADVRHDMLVSAMDDLN
DREKHILTERRLTDDPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRIAGEKRLIAA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgcagcaacgtccccgcgacgatacctgccctcggcggcgagcagagcctc
aaccgctacctcgccgagatcaagaaattccccatcctgcaacccgagcaggaatatatg
ctcgccaagcgctttcaggagcatggcgataccgaggcggcggcgcagctcgtcaccagc
cacctgcgcctcgtcgccaagatcgcgatgggctatcgcggctatggcctgccgacgtcg
gagctgatcagcgaaggcaatatcggcctgatgcagggcgtgaagaagttcgagcccgat
cggggcttccgcctcgccacctatgcgatgtggtggatccgcgcatcgatccaggaatat
atcctgcgctcgtggagcctcgtgaagatgggcaccacggcggcccagaagaagctgttc
tttaacctgcgacgcatgaagtcgaagctcgacgcgttcgaggacggcgacctgcgtccc
gaacacatcaccaagatcgcgaccgatctgggcgtcgccgaaagcgatgtcgtcagcatg
aaccggcgcatggcgatgggcggcgacacgtcgctcaacgtctcgatgcgcgaagatggc
gagggccagtggcaggactggttgcaggacgatgcgcccttgcaggacgcggtcgtcgcc
gacgcgcaggaggcggatgtccgtcacgacatgctcgtcagcgcgatggacgacctgaac
gaccgcgaaaagcacatcctgaccgagcggcgcctgaccgacgatcccaagacgttggaa
gagctgagccaggtgtacggcgtgtcgcgcgagcgcgtgcgccagatcgaggtgcgggcg
ttcgagaagctgcaaaaggcgatgatgcggatcgccggcgaaaagcgcctgatcgcggcc
tga
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