Sphingomonas sp. NIC1: A7E77_14175
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Entry
A7E77_14175 CDS
T04479
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snj03400
]
A7E77_14175
DNA repair and recombination proteins [BR:
snj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A7E77_14175
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_16
RecA
Lon_C
AAA_22
AAA_30
AAA
Glyco_hydro2_C5
AAA_5
DUF7125
nSTAND3
NACHT
AAA_14
AAA_29
NTPase_1
Rad51
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ANC87939
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All DBs
Position
3010313..3011686
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AA seq
457 aa
AA seq
DB search
MAKPQKRYVCQACGSVSHRWAGQCGDCAEWNTLVEEAGAVVTPFQAKHNLHTGGRTVQLV
GLDAEIALPERMATGIAELDRALGGGFVEGSATLIGGDPGIGKSTLLLQAAAKFALAGRS
VAYVSGEEAADQVRLRARRLGLGSAPVQLAAATSVRDILTTLSIGAPPALLVIDSIQTMH
SDLIEGAPGTVSQVRASAQELIRFAKERGTALVLVGHVTKDGSIAGPRVLEHMVDTVLSF
EGERSHQYRILRSIKNRFGGTDEIGVFSMQSEGLAEVANPSALFLTQRDEGVSGTTVFPA
LEGTRPVLVEIQALVVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFATAEVYLNI
AGGYRVQDPAADMAVAAALVSALSERPVPVDAVAFGEVALSGELRPVAHGALRLKEAGKL
GFERAMVPIALAKDDSALRLTGFRTLGQFVDHMLGRG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccgcagaaacgatatgtgtgccaggcgtgcggatcggtgtcgcatcgctgg
gcggggcagtgcggcgattgcgctgaatggaatacgctggtcgaagaggcgggtgcggtc
gttacgccgttccaggccaagcataatctgcacaccggtgggcggacggtgcagctggtc
gggctggatgccgagatcgcgctgcccgaacggatggcgacgggaatcgccgagctggac
cgggcactgggtggcggcttcgtcgaagggtcggcgacgctgatcggtggcgatccgggg
atcggcaagtcgacattgctgctgcaggcggcggcgaagttcgcgctggccgggcggtcg
gtcgcttatgtgtcgggcgaagaagcggcggaccaggtccggctgcgcgcgcggcggctg
ggtctgggaagcgcgccggtgcagctcgccgcggcgacctcagtacgcgatatcctgacg
acgctgtcgatcggcgcgccgccggcattgctggtgatcgattcgatccagacgatgcac
agcgacctgatcgagggcgcgccgggcacggtcagtcaggtgcgcgcatcggcgcaggaa
ctgatccgcttcgccaaggaacgcgggaccgcgctggtgctcgtcggccatgtcactaaa
gacgggtcgatcgcggggccgcgcgtgctggaacatatggtcgacacggtgctgagcttc
gaaggagaacgcagccaccagtatcgcatcctgcggtcgatcaagaaccgcttcggtgga
acggacgagatcggcgtgttctcgatgcagagcgaggggctggccgaagtcgccaatccg
tcggcgctgttcctgacgcagcgcgatgagggggtgagcgggacgactgtgttcccggcg
ctggaggggacgcggccggtgctggtggagatccaggcgctggtcgtgcgcctcgccagc
ggtgcgacgccgcggcgtgcggtggtcggctgggacagcgggcggctggctatgatcctg
gcggtgctggaggcgcggtgtggtctgagctttgcgacggcggaagtctatctgaacatt
gcgggcggctatcgcgtgcaggacccggcggcggacatggcggtcgcggcggcgctggtg
tcggcgctgtccgagcggccggtgccggtcgatgcggtggcgttcggcgaggtcgcgctg
tcgggcgagctgcgcccggtggcgcatggcgcgctgcggctgaaggaggcggggaagctc
ggcttcgaacgcgcgatggtgccgatcgcgctggccaaggacgacagcgcattgcggctg
acggggttccggacgctggggcagttcgtggatcatatgctggggcgggggtga
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integrated database retrieval system
