Sphingomonas sp. NIC1: A7E77_14300
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Entry
A7E77_14300 CDS
T04479
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snj03400
]
A7E77_14300
Enzymes [BR:
snj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7E77_14300
DNA repair and recombination proteins [BR:
snj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A7E77_14300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ANC87959
LinkDB
All DBs
Position
3034603..3037602
Genome browser
AA seq
999 aa
AA seq
DB search
MGGREGERAGTVEHKKRPQLFTIPAHRAFADTLVAGLMKRTGGDTMALARGLILLPNNRA
ARAVSAAFVRASGSGLLLPRLVTLGSPDLGEAVGAALDPVDDADPPPPAIAPMQRRMILA
RLVFEERAAAGAPVDAAEAVRLAGELCHTLDQLLVEEVEPERLRDLDLAPELTDHWQRAL
STFRIVLERWPGELARLGRIDAATRRRMLLDRLVMRWRTRPPAGFVCAAGVTDPAPAVAR
LLRCVAEAPQGLTVFAGLDLQMPEAEWDALGPHAPDPVTGRIRRSIETHPQFHLKLILDR
MGVGRGEVAHWPGSAGPDAGALRGRAIANALAPAAFTGKWTELKAEDRRLTGVAAVELAT
PAEEAQAIALALRGAIEEPGKTAALVTPDRALARRVSAHLRRWQIEANDTAGRPLSILPP
GTLLLALAEAAAQRFAPLALLALLKHPLVKVDPSDRALRGAWLDGTRTLDRALRGPRPAA
GLDGIMGHLLANRRDRAAAWFAEPVGLLKPIELVCDQGAQPLSALLAVLRETAQALCGDN
LWSGPAGRAAAEFLDALEAEAAVGPPRVAPDGFPPLLRGLLDEVAVRPGSGVGHPRIAIY
GPIEARLQTADLMVLGGLNEGVWPGRPAPDPWLAPRIRAALGLAGLERSVGIAAHDFGHA
LGAPRALVTRARRDAASPALASRLWLRLQAMAGDRFVRAHDLEGWALALDDPGQHIPADR
PAPVPGPALRPKAISVTEIDRLKADPYAFYARRVLGLMPLDPVDADPSAAWRGTAVHDIL
EQWWKQDGCAPDALVARATAMLEDERTHPMMRALWRPRLMEAVRWIADTVTAQDAEGRTV
ASAEGKGHVTIAGVTLSGRYDRVDRLADGTLAIVDYKTGKPPSAAAVRAGYSLQLGLLGA
IAERGGFQEVKGKAGGFEYWSLGKKKDQFGYIETPVDAEGKRDKIVTTEFTTIAVSNFVD
AAGTWLTGDAPFTAKLVPEYAPYAEYDQLMRRDEWYGRD
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgggtggccgggagggggagcgggccggaaccgtcgagcataaaaagcgcccgcaactc
ttcaccattccggcgcaccgcgcgttcgccgacacgcttgtcgcagggctgatgaagcgg
accggcggcgacacgatggcgctggcgcgcggcctgatcctgctgcccaacaatcgtgcc
gcccgcgcggtatcggcggcgttcgtacgggcgagcggcagcggcctgctgctgccgcgg
ctggtgacgctgggcagtcccgatctaggcgaggcggtgggcgcggcgctcgacccggtc
gacgatgccgatccgccgccaccggcaatcgcgccgatgcagcggcgcatgatcctggca
cgactggtgttcgaggagcgcgctgcggcgggtgcgcccgtcgatgccgcggaggcggtg
cggctggcgggcgaactctgccatacactcgaccagttgctggtcgaggaggtcgaaccc
gagcgtttgcgcgatctcgatctggcgcccgagctgaccgatcattggcagcgggcgctg
tcgaccttccggatcgtgctggaacgctggccgggtgaactcgcacgactgggtcggatc
gacgcagcgacgcggcggcggatgctgctcgaccggttggtgatgcgctggcggacacgg
ccgcccgctggcttcgtctgtgcggccggcgtgaccgatccggcgcccgcggtcgcgcga
ctgctgcgctgcgtcgcggaggcgccgcaggggctgacggtgttcgccgggctcgacctc
cagatgccggaggccgagtgggatgcgctggggccgcacgcgcccgatccggtgaccggg
cgcatccgccggtcgatcgagacgcatccgcaattccacctgaagctgatcctcgaccgc
atgggcgtcggccgcggcgaagtggcgcattggccgggcagcgccgggccggacgcgggg
gcgttgcgtgggcgcgcgatcgccaatgctttggcgccggccgccttcaccggcaaatgg
accgagctgaaggcggaggaccggcgcctgaccggggtcgccgccgtggaacttgcgacg
ccggcggaagaggcgcaggcgatcgcgctggcgctgcgcggtgcgatcgaggaaccgggc
aagaccgccgcgctggtgacgccggatcgcgcgctcgcccggcgggtcagcgcgcatttg
cggcggtggcagatcgaggcgaacgacacggcgggccggccgctgtcgatcctgccgccg
ggcacgctgctgctcgcgctggccgaggcggcggcgcagcggttcgcgccgctggcgctg
ctggcgctgctcaagcatccgctggtgaaggtcgaccccagtgaccgcgccctgcggggc
gcctggttggacgggacgcgcacgctcgatcgtgcgctgcgaggcccgcggccggcggcg
gggctcgacgggatcatggggcatctgctggccaaccggcgggatcgggcggcggcgtgg
ttcgccgagccggtcggcctgctgaaaccgatcgagctggtgtgcgatcagggggcgcag
ccgttgtcggcgctgctggccgtgctgcgcgagacggcgcaggcgctgtgcggcgacaat
ctgtggtcgggaccggcgggacgggctgcggcagagttcctcgacgcgctggaggcggag
gcggcggtcgggccgccccgcgtcgcgccagatggtttcccgccgttgctgcgcgggttg
ctcgacgaggtggcggtgcggccgggatcgggcgtcggccatccgcgtatcgccatttat
ggcccgatcgaggcgcggttgcagaccgccgacctgatggtgctgggcgggctgaacgaa
ggggtgtggccggggcggccggcgcccgatccgtggctggcaccgcgcatccgggcggcg
ctggggctggccgggctggagcggagcgtcggtatcgcggcgcacgatttcggccatgcg
ctgggcgcgccgcgcgcgctggtgacgcgggcgcggcgcgatgcggcgtcgcccgcgctt
gcgtcgcggctgtggctgcgattgcaggcgatggcgggggatcgcttcgttcgagcgcat
gatctggaagggtgggcgctcgcgctggacgatcccggtcagcatatcccagccgaccgg
ccggcgccggtgccggggcccgcgctgcggccgaaggcgatctccgtcaccgagatcgac
cggctgaaggcggatccttacgccttttacgcgcgccgagtgctggggctgatgccgctc
gacccggtcgatgccgatcccagcgcggcgtggcgcggcaccgcggtccacgacatcctc
gagcaatggtggaagcaggacggttgcgcgccggacgcgctcgtcgcgcgcgccaccgcg
atgctggaggacgagcggacgcacccgatgatgcgcgccttgtggcgaccgcggctgatg
gaggcggtgcgctggatcgccgacaccgtgacggcgcaggacgctgaaggacgcacggtc
gcctcggcggaaggcaagggccatgtgacgatcgccggcgtgacgttgtcgggccggtac
gaccgcgtcgatcggctggcggacggcacgctcgcgatcgtcgattacaagaccggcaag
ccgccctccgccgccgcggtgcgcgcggggtatagcctgcaactcgggctgctcggcgcg
atcgcggagcggggcggctttcaggaggtgaagggcaaggccggcggcttcgaatattgg
tcgcttggcaagaagaaggatcagttcggctatatcgagacgccggtggatgccgagggt
aagcgcgacaagatcgtcacgaccgaattcacgacgatcgcggtcagcaatttcgtggac
gctgccggcacgtggctgaccggcgatgcgccgttcaccgcgaagctggtcccggaatat
gcgccttatgccgaatatgaccaattgatgcgccgggacgaatggtatggccgggactga
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