Sphingomonas sp. NIC1: A7E77_14305
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Entry
A7E77_14305 CDS
T04479
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snj03400
]
A7E77_14305
Enzymes [BR:
snj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7E77_14305
DNA repair and recombination proteins [BR:
snj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A7E77_14305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ANC87960
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All DBs
Position
3037589..3041011
Genome browser
AA seq
1140 aa
AA seq
DB search
MAGTELATLPRLKGAQAAASDPHAHVWLSASAGTGKTQVLAARVFRLLLRGTDPSAILCL
TFTKAGAAEMAQRINNRLAAWVRMPAPQLYADLEALGEKGTPDLQARARTLFAGVLDAPG
GGLRIQTIHGFCQSLLAAFPVEAGLTPGFRPLEAREEAVLARETLATLLTDAEREGRERP
IETIGALSLRLGEGGAESFLLACARSLNALEALPIGIGPWLRRALDLPQGDIGEALAEGC
DCIDTDLVERLAAANTAWGAATGVGHAETLNRWLAAAPAERAATLGDLAGVVLTGKNEPR
KASKKLIDAEPDYADLASALGQHCLDLLSLTARAAYADLLADALEVGRDYARAYAAAKRR
TGAVDFDDLIGVTVRLLEQPGIGEWVRYKLDQGTEHVLIDEAQDTNLNQWRIVTALAGEF
FVGRGVHSPSTRTLFTVGDFKQAIFGFQGTDPINFRWAEGHFASRAAEVEGADDWPEAER
GLPFQRLSLTHSFRSTRPILEFVDAAIAAAGEPGLGAIDAMQAHASEVPGPGTVELWPPV
IAGGSETDEEAWIDDAVREQAVRIARAVRDWLNGGLMLESKGRALRPEDVMILVKRRGDL
ASLIVARLYAEGVPVAGVDRLRLNAPLAVQDLLAAVRFVLQPEDDLSLAALLVSPLIGWT
QDELMHAAPREHGSLWRHLTQTLSEERLAPLRAMLSRADIATPYQFLEEILSGPLDGRRK
LLRRLGAEARDPIEELLNAALAFETTSTPSLQRFLDWFDRGDVEIVRDPSAPLDAVRVMT
AHGAKGLQAPLVILADATVDPTAAPRALVRWVPEPGAQPIPIFRPRSGERGGPLDVAIGE
VERRELEEHWRLFYVAATRAEERLVIGGALGPRAQGEPPVASWYAAAARALTELGVPDEG
PRVFSGSDPQPPVKPRGAALARPPERVVLPDWAHVPAPPESRPSRPLTPSALGEDEVSDP
PPGPAMRAAAERGRLFHALFERLPPVEPQHRAGCADRWLATAGGVTDAAERQRIVAGVLA
VIENSAYAPSFGPDSLAEAPIAATLANGMVVSGTVDRLLIAPDAIRLVDFKTGRRVPDTL
DDIPPYHLDQMAAYIAALRVIFPDRTIEAALLYTGGPRLFELPADTLAAHKPRFRVPEQS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggccgggactgaactggcgaccctgccgcggctgaagggcgcgcaggcggcggcgagc
gatccgcacgcgcacgtctggctgtccgcatcggccggcaccggcaagacgcaggtgctc
gccgcgcgcgtgtttcgcctgttgctgcgcggcaccgatccgtcggcgatcctgtgcctg
accttcaccaaggcgggcgcggccgaaatggcgcagcggatcaacaaccggctggccgcc
tgggtgcgcatgccggcaccgcagctgtacgccgatctggaggcgctgggcgagaagggt
acgccggatttgcaggcgcgggcgcggacgctgtttgcaggcgtgctcgatgcgccgggt
ggcggcttacgcattcagacgatccatgggttctgccagagcctgctcgccgcgtttccg
gtcgaggcggggctgacccccggctttcgtccgctggaggcacgcgaagaggcggtgctg
gcgcgcgagacgctggcgaccctgctgaccgatgccgagcgcgagggccgcgaacggccg
atcgaaacgatcggcgcgctgtctctgcggctgggcgagggcggggcggagagcttcctg
ctcgcctgcgcacggtcgctgaacgcgctggaggcgctgccgattgggatcgggccgtgg
ttgcggcgcgcgcttgacctgccgcagggggatatcggcgaggccttggccgagggctgc
gactgtatcgacaccgatttggtcgagcggctggcggcggcgaacaccgcttggggcgcg
gccacgggcgtggggcatgccgaaacgctcaaccgctggctcgcggcggcaccggcggag
cgggccgcgacgctcggcgaccttgccggcgtggtgctgacggggaagaacgagccgcgc
aaggcatcgaagaagctgatcgatgccgaacccgattatgccgacctggcctcggcgctg
gggcagcattgcctcgacctgctgtcgctcaccgcgcgggccgcttatgccgatctgctg
gccgacgcgctggaggtgggccgcgactatgcacgcgcctatgccgcggcgaagcggcgg
accggggcggtcgatttcgacgatctgatcggcgtgacggtgcggctgctggaacagccg
ggcatcggcgaatgggtgcgctacaagctcgatcagggcaccgagcatgtgctgatcgac
gaggcgcaggacacaaacctcaaccagtggcggatcgtcaccgcgctggcgggggagttt
ttcgtcgggcgcggtgtgcattcgccctcgacccggacgctgttcacggtcggcgatttc
aaacaggcgatcttcggctttcagggcacggacccgatcaacttccgctgggcggagggg
catttcgccagtcgcgcggcggaggtggagggggcggacgactggccggaggcggaacgc
ggcctgccgttccagcgcctgtcgctgacgcattccttccggtcgacacggcccattctg
gagttcgtcgatgccgccatcgccgcggcgggcgagcccggccttggcgcgatcgacgcg
atgcaggcgcatgccagcgaggtgcccggccccggcacggtcgagctgtggccgccggtg
atcgcaggtggcagcgaaacggacgaggaagcgtggatcgacgatgccgtccgcgaacag
gcggtgcggatcgcgcgcgcggtgcgagactggctgaacggcggcctgatgctggagagc
aaggggcgggcgctcaggcccgaggacgtgatgatcctcgtcaagcggcgcggcgacctc
gcctcgctgatcgtcgcgcgcctgtatgccgagggcgtgccggtagcgggcgtcgaccgg
ttgcggctgaatgcgccgctggcggtgcaggatttgctcgccgcggtgcgcttcgtcttg
cagccggaggacgatctgtcgctcgcggcgttgctagtctcgccactgatcggctggacg
caggacgaattgatgcatgccgcgccacgggagcatggcagcctctggcggcacctgacg
cagacgctgtcggaggagcgcttggcgccactgcgcgcgatgctgtcgcgcgccgatatc
gcgacgccctaccagtttctcgaagagatcctgtcggggccgctcgacgggcggcgtaag
ctgttgcgccggctgggggcggaggcgcgcgatccgatcgaggaactgctcaacgccgcg
ctggcgttcgagacgacgtcaacgccgtcgctgcaacgcttcctcgactggttcgaccgc
ggggatgtcgagatcgtgcgcgacccgtcggcgccgctcgacgccgtgcgcgtgatgacc
gcgcatggcgcaaagggcttgcaggcgccgctggtgatcctggcggacgcgaccgtcgat
cccaccgccgcgccgcgcgcgctggtgcgctgggtgccggaaccgggggcgcagccgatc
ccgatcttccggccccggtcgggcgagcgtggcgggccgctggatgtagcgatcggcgag
gtcgagcgccgtgagttggaggagcattggcggctgttctacgtggctgcgacgcgggcc
gaggaacggctggtgatcggcggcgcgctggggccgcgcgcccaaggcgagccgccggtc
gcgagctggtatgcagccgccgcacgcgcactgaccgagctgggcgtgccggacgagggg
ccgcgcgtgttcagtggctccgatccccagccgccggtcaagccgcgtggcgctgcgctg
gcacgcccgcccgaacgggtggtgctgcccgattgggcgcatgtgcccgcgccgcccgag
agccgcccgtcgcgcccgctcaccccgtcggcactcggtgaggacgaggtcagcgaccct
ccgcccggccccgcgatgcgtgccgctgccgaacgcgggcggctgtttcacgcgctgttc
gaacgcctgccgccggtcgagccgcaacatcgcgccggctgcgcggatcgctggctcgcc
actgcgggtggtgtgaccgatgcggccgagcggcagcggatcgtcgcgggcgtgctcgcg
gtgatcgagaactccgcctatgcgccgtcgttcggccccgacagcctcgccgaagcgccg
atcgccgcgacgctcgccaacggcatggtcgtgtcgggcaccgtcgaccggctgctgatc
gcgccggacgcgattcgtctcgtcgatttcaagacggggcggcgggtgccggataccctc
gacgatatcccgccctatcacctcgatcagatggcggcctatatcgcggcgctgcgcgtg
atcttccccgatcgcacgatcgaggcggcgttgctctacaccggcggcccgcgtctgttc
gaactgcccgccgacacgctcgccgcgcacaagccgcgctttcgcgttccggagcaaagc
tag
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