KEGG   Sphingomonas sp. NIC1: A7E77_15235
Entry
A7E77_15235       CDS       T04479                                 
Name
(GenBank) RNase adaptor protein RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
snj  Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:snj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snj03019]
    A7E77_15235
Messenger RNA biogenesis [BR:snj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     A7E77_15235
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_22 AAA_33 AAA_18 Rad17 AAA_29 AAA_16 ABC_tran AAA_28 ZSWIM1-3_C CoaE AAA_30 APS_kinase RsgA_GTPase dNK
Other DBs
NCBI-ProteinID: ANC88125
LinkDB
Position
3253511..3254419
AA seq 302 aa
MTKDILLVTGLSGAGKSTVLKTLEDLGWEVVDNLPLALLDRLLEAPLAQGAADGTQPLAL
GIGARTRDFDPKRIIERIRALREGHGLDVGMLFLDCAGSELERRYSETRRRHPLAPDRPA
SDGIARERELLAPLREWANRLIDTTDLSANMLAQKVRSTFAVSGSDAPVLSIQSFGFARG
IPRNADLVFDMRFLRNPHWDPVLRPGTGLDADVSAYVAADPAYPAAMEQIGSLLELLIPR
YRAEGKAYVSVAIGCTGGRHRSVHVAEHLARRLRDAGFSPTITHRDLGAAPQDSLEGPPA
SK
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaccaaggacattctgctcgtcaccggcctgtcgggtgcgggcaagtcgaccgtgttg
aagacgctggaagacctggggtgggaggtggtcgacaatttgccgctcgccctgctggat
cgactgttggaagcgccgctggcgcagggagcggcggatggtactcagccgttggcgctg
ggtatcggtgcgcggacgcgcgacttcgacccgaaacggatcatcgagcgcatccgcgcc
ctgcgcgaaggccatgggctcgacgtcggcatgctgttcctcgattgcgcgggctccgag
ctcgagcgccgctattcggaaacgcggcgacgccacccgctggcgccggaccgaccggcg
agcgacggcatcgctcgtgagcgcgagctgctggccccgctgcgcgaatgggcgaatcgg
ctgatcgacaccaccgacctcagcgccaacatgcttgcgcaaaaggtgcggtcgaccttc
gctgtgtcgggcagcgacgcgccggtgctgtcgatccagtcgttcggtttcgcccgcggc
atcccgcgcaacgccgatctggtgttcgacatgcgcttcctgcgcaatccgcactgggac
cccgtgctgcgaccgggcaccggactggacgccgacgtttccgcttatgtcgccgcagac
cccgcctatcccgccgcgatggaacagatcggcagtctgctcgaactgctgattccgcgc
tatcgcgctgaggggaaagcctatgtcagcgtcgcgatcggctgcaccggcgggcggcat
cgctcggtccatgtcgcggaacatctcgctcgacggttgcgcgacgcgggtttttcgccc
accattacgcatcgcgacctgggggccgcaccgcaggactcgctcgaggggccgccggcc
agcaaatga

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