Sphingomonas sp. NIC1: A7E77_15555
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Entry
A7E77_15555 CDS
T04479
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
snj
Sphingomonas sp. NIC1
Pathway
snj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7E77_15555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snj03019
]
A7E77_15555
Messenger RNA biogenesis [BR:
snj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A7E77_15555
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Ortholog
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ANC88182
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Position
3330129..3330623
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AA seq
164 aa
AA seq
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MTDPTTLPYRPCAGVMLLNRDGRVFVGQRIDTTLEAWQMPQGGIDPGEEAYDAAVRELGE
ETGVAPQHVELIVEAPRDFLYDLPTDMIGKVWKGKWRGQRQRWFLFRFLGEDRDIDIATE
HQEFRAWRWSDPADLPTMIVPFKRALYEDVLAAFAPHLAAAGPR
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccaccaccctgccctatcgcccctgtgccggcgtgatgctgctgaaccgc
gacggcagggtcttcgtcgggcagcggatcgatacgacgctggaggcgtggcagatgccg
cagggcgggatcgatccgggcgaagaggcctatgacgccgcggtgcgcgaactgggcgag
gaaaccggcgtcgcgccgcagcatgtcgagctgatcgtcgaggcgccgcgggactttctg
tacgacctgccgaccgacatgatcggcaaggtgtggaagggcaagtggcgcgggcagcgg
cagcgctggttcctgttccgcttcctgggcgaggaccgtgacatcgatatcgcgaccgag
catcaggagtttcgcgcctggcgatggagcgaccccgccgacctgccgacgatgatcgtg
ccgttcaagcgcgcgctgtacgaggacgtgctcgccgcgttcgcgcctcatctcgccgca
gcgggcccacgctga
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