Sphingomonas sp. NIC1: A7E77_15800
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Entry
A7E77_15800 CDS
T04479
Name
(GenBank) tRNA pseudouridine(38,39,40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snj03016
]
A7E77_15800
Enzymes [BR:
snj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
A7E77_15800
Transfer RNA biogenesis [BR:
snj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A7E77_15800
Prokaryotic type
A7E77_15800
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ANC88224
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All DBs
Position
3389578..3390315
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AA seq
245 aa
AA seq
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MTRFALTIEYDGRPFMGWQRQKHGPSVQQTLEEAVFAVTGETAAVHAAGRTDAGVHGLGM
RAHVDIAKTIAPFRLMEALNARVRPAPVAVLDCVEVADDWHARFSCVGRAYEYRIVNRRA
PLTWEAGLAWQVPQPLNADAMAAAAAVLVGRHDFTTFRSAHCQADSPVRTLDMLSVERNG
DRIAVRAAARSFLHHQVRSMVGCLALVGRGQWSVADVAEALAARDRARLGLNAPPDGLFF
MTAVY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcggttcgcgctcacgatcgaatatgacggccggccgttcatgggctggcagcgg
cagaagcacgggccgagcgtgcagcagacgctggaagaggcggtgttcgccgtcaccggc
gagacggccgcggtgcacgccgcggggcggaccgatgcgggcgtgcatgggctgggcatg
cgcgcgcatgtcgatatcgccaagacgatcgcgccgttccggttgatggaggcgctcaat
gcgcgggtgcggccggcaccggtcgcggtgctcgactgcgtggaggtggcggacgattgg
catgcgcgcttttcgtgcgtcgggcgggcgtatgagtatcgcatcgtcaaccggcgcgcg
ccgctgacctgggaagcggggctggcgtggcaggtgccgcagccgctcaacgccgatgcg
atggcggcggcggcggcagtgctggtcgggcggcacgactttaccaccttccgctccgcg
cattgccaggccgacagtccggtgcggacgctggatatgctatccgtcgagcggaatggc
gatcggatcgcggtgcgggcggcggcgcgctcgttcctgcaccatcaggtgcgatcgatg
gtcgggtgcctggcgctggtcgggcgggggcagtggtcggtcgccgacgtcgccgaggcg
ctcgcggcgcgggatcgcgcgcgcctggggctgaatgcgccgcccgatgggttgttcttc
atgacggcagtgtattga
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