Sphingomonas sp. NIC1: A7E77_16755
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Entry
A7E77_16755 CDS
T04479
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
snj
Sphingomonas sp. NIC1
Pathway
snj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A7E77_16755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snj03400
]
A7E77_16755
Enzymes [BR:
snj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A7E77_16755
DNA repair and recombination proteins [BR:
snj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A7E77_16755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
TraI_2B
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
ANC88620
LinkDB
All DBs
Position
unnamed2:complement(91918..93336)
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AA seq
472 aa
AA seq
DB search
MLKEHASRVGPAKPNEQLSALMKGKVVVLEEASMVSSRQLAGLFEVARNGEAAKLVLVGD
VKQIPAVEAGRPFALLQEAEAPTVRLTENRRQQTDVLREAASLAREGRVAAAFERLGNKV
QENAHPAGAAVVEYLQLSPEERDRTALLTSGHVLREAVLETVRAELLARGKLGADALSLR
SWDTLNLTREELRQIRHWAEGMRLDIYRHQSGLVPGSYEVGLIDRASGMLELARDGQTRL
FDPKSLRSGGEGAALSVPGEIEVREGDRLVFTASDLKRGMANGAAMTLTAIDGDTLHLSG
RDRDHVIGPDDPMRERLGHGAVINMHRAQGMTVDRAITVMDSRDRLLNSESLYYVLQTRA
REDVSLHTDDKKALANAIESHRGDVPHASDVAPELSLSGRERFDPATGELPRLDDPGASD
RRQLEAMSAALRSIGSEPAKPVAEAVRQAPVPVRELVKEPEIEIDHDYDFDM
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaaggagcatgctagccgggtcggcccggccaagccgaacgagcagctgtcggcg
ctgatgaagggcaaggtcgtggtgctggaggaggcctcgatggtgtcctcgcgtcagctt
gccgggttgttcgaggtcgcccggaacggcgaggccgccaagctggtgctggtcggtgac
gtgaagcagatacccgccgtagaggccgggcggccgttcgcgctgctgcaggaggcggag
gctccgacggtgcggctgaccgagaaccggcgccaacagaccgatgtgctccgtgaggcc
gcctccctggcacgcgagggcagggtcgctgctgctttcgaacggctcgggaacaaggtc
caggagaacgctcatcccgcaggagcggccgttgtagaatatctgcagctttcgcccgaa
gaacgcgaccgcaccgccttgctcacttcggggcacgtgctgcgcgaagccgtgctggag
acggttcgggccgagctgctggctagaggaaagctgggcgcggacgccctgagcctgcgc
agctgggacacgctgaacctgacccgcgaggagctgcgccagatccggcattgggcggag
gggatgcggctcgacatctaccgccaccagtcagggcttgtgccgggatcctacgaggtt
ggcttgatcgatcgggcgagcggcatgctcgagctcgcccgtgacggtcaaaccaggctc
ttcgatcccaaaagcctccgatcgggaggggagggggccgcgctctccgttcccggagag
atcgaagttcgcgaaggtgaccgcttggtcttcacggccagcgacctgaagcgcgggatg
gcgaacggtgctgcgatgacgctcaccgcgatcgatggcgacacgctccacctgtccggc
cgtgaccgggatcatgtgatcgggcccgacgatccgatgcgcgagcggcttggccatggc
gctgtcatcaacatgcaccgtgcgcaagggatgacggtcgatcgcgcgatcacggtgatg
gacagccgcgacaggctgctgaacagcgagagcctctactacgtgctccagacccgcgcg
cgcgaggacgtgtcgctgcacaccgacgacaagaaagcgctcgccaacgcgatcgagtca
catcgcggtgacgttccgcacgcgagcgatgtggcacccgagctctcgttgtccggtagg
gagcgattcgatccggccacgggcgagctgccccgactagacgatcctggcgcgagcgat
cgccgccaactggaggcgatgagtgccgccctccgatccatcggcagcgagcctgccaag
ccggtggcggaggctgttcggcaggcgccggttccggtcagagagctggtgaaggagccg
gagatcgagatcgaccacgattacgacttcgacatgtga
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