Streptomyces nitrosporeus: CP967_04360
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Entry
CP967_04360 CDS
T06889
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
snk
Streptomyces nitrosporeus
Pathway
snk00040
Pentose and glucuronate interconversions
snk01100
Metabolic pathways
snk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CP967_04360
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CP967_04360
Enzymes [BR:
snk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CP967_04360
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QEU71290
UniProt:
A0A5J6F8M3
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Position
complement(979603..981171)
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AA seq
522 aa
AA seq
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MKRPVARRLYAAVATMAVAAATGAIMTIPDEASAATGGVTGFATQNGGTTGGAGGQTVKA
TTGTAIHEALCNRASSSTPIIIQVEGTINHGNTAKVSGDSCNTAAGVIELKQISNVTIVG
VGSGAVFDQLGIHIRQSSNIIIQNVSVKNVKKSGSPTSNGGDAIGMESDVRNVWVDHVSL
EASGGESEGFDGLFDMKDNTQYVTLSYSTLRNSGRGGLIGSSETELSNGFVTFHHNLYEN
IDSRAPLLRGGIAHMYNNYYVKLNESGINSRAGARAKVDNNYFKDSKDVLGTFYTDAAGS
WQVSGNTFDNVTWSAPGNEYNPAGPNPKSNTTVNIPYAFSLDSASCVPDVVARTAGANKG
LQVSDGNCTPTTPTPGPTTPTPDPTDPTPDPTDPTPGPTDPPAGTNLSIGAGADGSSKAS
GTSYGNVRDGDLNTYWSPAGSTGSVSVKWGTAITISKINIRQASGSAIGSWRVLNGDTGA
VLSSGSGAGVISFPATSLKKVTFEITSSSGTPKVAEFETYAG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaccagtcgcacggcgactctatgcggcagtggccacgatggccgtggcggcc
gcgaccggggcgatcatgacgatccccgacgaggcatcggcggccaccggcggtgtcacc
ggtttcgccacccagaacggcgggaccaccggtggcgccggcgggcagaccgtgaaggcc
accacgggcaccgcgatccacgaggccctctgcaaccgggcgagcagcagcaccccgatc
atcatccaggtcgaggggaccatcaaccacggcaacacagccaaggtgtcgggtgacagc
tgcaacaccgcggcgggtgtgatcgagctcaagcagatcagcaacgtcaccatcgtcggt
gtcggcagcggtgcggtcttcgaccagctgggcatccacatccggcagtccagcaacatc
atcatccagaacgtgagcgtcaagaacgtcaagaagtccggctcgcccacatccaacggc
ggcgacgccatcggcatggagagcgacgtccgcaacgtctgggtcgaccacgtcagcctg
gaggcgtcgggcggcgagtcggaggggttcgacggcctcttcgacatgaaggacaacacg
cagtacgtcaccctgtcctacagcaccctgcgcaactccggccggggcgggctcatcggg
tccagtgagacggaactctccaacgggttcgtgaccttccatcacaacctgtacgagaac
atcgactcccgggcgcccctgctgcgtggcggtatcgcccacatgtacaacaactactac
gtgaaactcaacgagtccgggatcaactcccgtgccggagcccgcgccaaggtggacaac
aactacttcaaggactccaaggacgtcctgggaaccttctacaccgacgcggccgggtcc
tggcaggtcagcggcaacaccttcgacaacgtgacctggtccgcgcccggaaacgagtac
aacccggccggaccgaacccgaagtccaacaccacggtcaacatcccgtacgcgttcagc
ctcgactccgcctcctgcgtcccggacgtcgtggcccgtacggccggcgccaacaagggg
ctccaggtgtcggacggcaactgcacgccgaccacgcccaccccgggcccgaccaccccc
accccggacccgacggacccgacgccggacccgaccgacccgacgcccggccccacggac
ccgcccgccgggaccaacctcagcatcggcgccggagcggacggctccagcaaggcaagc
ggtaccagctacggcaacgtccgcgacggtgacctgaacacctactggtcaccggcgggc
tcgaccggttccgtctcggtcaagtggggcaccgccatcaccatctccaagatcaacatc
cgccaggcctccggttccgccatcggctcctggagggttctgaacggtgacaccggtgcc
gtcctgagttccggcagcggagcgggcgtcatctccttcccggcgacctcgctgaagaag
gtcaccttcgagatcaccagctcgtccggtaccccgaaggtcgccgagttcgagacctac
gccggataa
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