Streptomyces nitrosporeus: CP967_05835
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Entry
CP967_05835 CDS
T06889
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
snk
Streptomyces nitrosporeus
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snk03016
]
CP967_05835
Enzymes [BR:
snk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CP967_05835
Transfer RNA biogenesis [BR:
snk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CP967_05835
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QEU71546
UniProt:
A0A5J6F6B4
LinkDB
All DBs
Position
1326312..1327586
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AA seq
424 aa
AA seq
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MTDAQETAEDTSLRTTGGAPPDDVAPAPIPLLEPREGIPPVVATDDALAGVVAAFAAGRG
PVAVDAERASGYRYGQRAYLVQLRREGAGSTLIDPVGCPDLSVLGDALTGTEWILHAATQ
DLPCLRDIGMVPTSLFDTELAGRLAGFPRVGLGAIVENLLGYALEKGHSAVDWSTRPLPE
PWLRYAALDVELLVDLRDALEAELERQGKLEWALEEFEAIASAPPAPPRKDPWRRTSGMH
KVRRRRQMAVVRELWTARDQVAQRRDVSPGKVLGDAAIIEAALAMPSHVQALTALPGFGH
RMGRRQLEQWQAAVDRARALPEAELPQPGQQPAGPPPPRAWADKDPAAAARLSAARTAVS
GLAEQLHMPQENLITPDTVRRVCWEPPKSLTPGAVETALAGYGARRWQIEQVAPLLLRAL
GSGA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagaagacacatcactgcgaaccaccgggggcgctccc
ccggacgacgtcgccccggcgccgatccccttgctcgaaccgcgcgagggcatccccccg
gtggtggcgaccgatgacgcgctggccggggtcgtggcggccttcgccgcggggcggggc
cccgtggcggtcgacgccgagcgcgcctccggttaccgctacggccagcgcgcctacctc
gtccagctgcgccgcgaaggcgccgggagcacgctgatcgatccggtcggctgccccgac
ctgtcggtcctgggcgacgcgctgaccggcaccgagtggatcctgcacgcggcgacccag
gacctgccctgcctgcgcgacataggcatggtccccacctcgctcttcgacaccgagctg
gccgggcggctggccgggttcccccgggtcggcctcggcgccatcgtcgagaacctcctg
gggtacgccctggagaagggccactccgccgtcgactggtccacccgccccctgcccgag
ccgtggctgcgctacgccgcgctcgacgtcgagctgctggtggacctgcgcgacgccctg
gaggcggagctggagcggcagggcaagctggaatgggccctggaggagttcgaggccatc
gcgtcggcaccccccgcgcccccgcgcaaggacccctggcgccggacctccggcatgcac
aaggtgcgccgccgccgccagatggccgtcgtacgggagctgtggaccgcccgcgaccag
gtggcgcagcgccgggacgtgtcgcccggcaaggtcctcggcgacgcagcgatcatcgag
gcggccctggccatgccctcccatgtgcaggcgctgaccgcgctgcccgggttcggccac
cggatggggcgccgccagctcgaacagtggcaggcggccgtggaccgggccagggcgctc
cccgaggcggagctgccgcagcccggccagcagccggccggcccgccgcccccgcgggcc
tgggccgacaaggacccggccgcggcggcccgtctgtcggcggcccgtacggcggtgtcg
gggctcgccgagcagctgcacatgccgcaggagaacctgatcacccccgacacggtgcgg
cgggtctgctgggagccgcccaagagcctcaccccgggggcggtggagacggcgctggcc
gggtacggcgcacgccggtggcagatcgagcaggtcgccccgctcctgctgcgcgcgctg
ggcagcggcgcctga
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